KEGG   Gossypium hirsutum (upland cotton): 121225563
Entry
121225563         CDS       T04793                                 
Name
(RefSeq) ras-related protein RABE1c-like
  KO
K07901  Ras-related protein Rab-8A
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    121225563
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ghi04131]
    121225563
   03036 Chromosome and associated proteins [BR:ghi03036]
    121225563
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ghi04147]
    121225563
   04031 GTP-binding proteins [BR:ghi04031]
    121225563
Membrane trafficking [BR:ghi04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab GTPases
    121225563
 Autophagy
  Other autophagy associated proteins
    121225563
Chromosome and associated proteins [BR:ghi03036]
 Eukaryotic type
  Centrosome formation proteins
   Other centrosome associated proteins
    121225563
Exosome [BR:ghi04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   121225563
  Exosomal proteins of other body fluids (saliva and urine)
   121225563
  Exosomal proteins of colorectal cancer cells
   121225563
GTP-binding proteins [BR:ghi04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab8/10/13 [OT]
    121225563
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU MMR_HSR1 Gtr1_RagA C2c1_Nuc-II RsgA_GTPase
Other DBs
NCBI-GeneID: 121225563
NCBI-ProteinID: XP_040965844
LinkDB
Position
D13:2115587..2119108
AA seq 215 aa
MAAPPARARADYDYLIKLLLIGDSGECGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIEL
DGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASD
NVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIATDIKQ
RLTESDNKAEPTGLKINKQDSAAASQAAQKSGCCG
NT seq 648 nt   +upstreamnt  +downstreamnt
atggctgcaccaccggcaagagctcgggctgattatgattacctcattaagcttcttttg
attggcgatagtggtgagtgtgggaagagttgtctgcttttacgtttttctgatggttcc
tttactactagtttcataacaactatcggcattgattttaagataagaaccattgagctt
gatggtaagagggtcaaattgcaaatctgggatacagctggtcaagagcgatttcgaact
attacaacagcttactaccgtggagccatggggattttgctggtttatgatgttactgat
gagtcatctttcaacaatattcggaattggattcgcaatattgaacaacatgcttcagac
aatgtcaacaagatactggttggaaataaggctgacatggatgagagcaaaagggctgtg
ccgacctccaagggtcaagccctcgccgatgagtatggtatcaagttcttcgaaactagt
gcaaagacgaatttgaatgtggaggaggttttcttttcaatagccaccgacattaagcaa
aggcttacagagtctgataacaaggctgagcctactggactcaaaattaataagcaagac
tcggcagcagctagtcaagctgctcaaaagtcgggttgctgtggataa

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