KEGG   Gossypium hirsutum (upland cotton): 121227892
Entry
121227892         CDS       T04793                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RMA3-like
  KO
K10666  E3 ubiquitin-protein ligase RNF5/185 [EC:2.3.2.27]
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    121227892
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ghi04121]
    121227892
Enzymes [BR:ghi01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     121227892
Ubiquitin system [BR:ghi04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    121227892
SSDB
Motif
Pfam: zf-C3HC4 zf-RING_UBOX RING_XB3-XBAT31 zf-C3HC4_2 zf-RING_5 zf-C3HC4_3 zf-RING_2 zf-C3HC4_4 Prok-RING_4 zf-rbx1 FYVE zf-ANAPC11
Other DBs
NCBI-GeneID: 121227892
NCBI-ProteinID: XP_040966746
UniProt: A0ABM3BI91
LinkDB
Position
A04:complement(6264547..6266605)
AA seq 251 aa
MAMEPNFFEQEGQSEPGNISLKHKWDSISSPTGDQNKDTSGFDCNICFDSAQDPVVTLCG
HLYCWPCIYKWLHVQTSSLDADQRQRNCPVCKANISSSSLVPLYGRGTASDCQSKDPHSD
LDIPQRPPSLGLNPMTTYSQPSQQLHENLFRHQQYFPHPYGDYATLASSSLGGIAMTNFF
NPMFGMLEEMVYARISGSSNTSIFTYPYQSSNLFFGNNNLRMRRQEMQVDKSLSRVSIFL
FCCIILCLVLF
NT seq 756 nt   +upstreamnt  +downstreamnt
atggctatggaaccaaacttctttgagcaagaagggcaatctgagcctggaaatatatcc
ctcaagcacaaatgggattcaatatcatcaccaacgggagaccaaaacaaggataccagc
ggctttgattgcaacatttgcttcgactctgctcaagatccagtggtcaccctctgtggt
cacttatactgctggccttgcatttacaagtggcttcatgtccaaacttcttcccttgat
gcagatcaacgacaacggaactgccctgtgtgcaaagcgaacatctcttctagttcattg
gttcccctctatggtcgtggcacagcttctgactgtcaatccaaggatcctcattcagat
ttggacattccccaaaggccaccttctctcggattgaaccctatgaccacatattcacag
ccaagtcaacaactccatgaaaatctttttcgtcaccagcaatacttccctcacccttat
ggagactatgcaaccttagcatcatctagcctcggtggtatagcgatgacgaatttcttc
aatcctatgtttgggatgttagaggaaatggtgtatgcacggatatcagggagctcaaac
acaagtatttttacttatccttaccaatcttcgaatctgttttttgggaataacaatctc
aggatgagaaggcaagaaatgcaggtcgacaaatctcttagtagagtatccatctttcta
ttttgttgcatcattctttgtcttgtcttgttttga

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