KEGG   Gossypium hirsutum (upland cotton): 121228213
Entry
121228213         CDS       T04793                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RMA1H1-like
  KO
K10666  E3 ubiquitin-protein ligase RNF5/185 [EC:2.3.2.27]
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    121228213
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ghi04121]
    121228213
Enzymes [BR:ghi01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     121228213
Ubiquitin system [BR:ghi04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    121228213
SSDB
Motif
Pfam: zf-C3HC4 zf-RING_UBOX zf-C3HC4_2 zf-RING_2 zf-C3HC4_4 zf-C3HC4_3 zf-RING_5 RING_XB3-XBAT31 Prok-RING_4 zf-ANAPC11 zf-rbx1 FYVE zf-RING_Vps41 zf-Di19 TRAF3_RING Baculo_IE-1 zf-LITAF-like
Other DBs
NCBI-GeneID: 121228213
NCBI-ProteinID: XP_040967453
UniProt: A0ABM3BK67
LinkDB
Position
A04:82044386..82046553
AA seq 238 aa
MIIEQYMESKICLQEWMDSPGSVSVSDDNPSRSFDCNICLDSVQDPVVTFCGHLFCWPCI
YKWLSTRNQGQKQHICPVCKAEVSDTTLIPLYGRGSVTSKESRPKASQFGMVIPKRPPGP
TCGVSTIQGSPDTTDNHGYSYQPQAYFPQQDSYPDSPMFSPRGTPINVPDPVIRMFGEMV
YTRVFGNSVTNFYTYPNSYNLARSTSPRIRRHVMQADKSLGRISFFLFCCIFLCLLLF
NT seq 717 nt   +upstreamnt  +downstreamnt
atgatcattgagcagtacatggaaagtaagatttgcctgcaggagtggatggattcacca
ggttcggtctcggtttcggatgataacccgtcgagaagctttgactgtaacatctgcctc
gactcagtgcaggatccggtggtcacattttgtggtcacctgttttgttggccttgcatc
tataaatggctttccactagaaaccaaggccagaaacaacacatatgtcctgtatgcaaa
gctgaagtttcggataccacactgattccactttacggcaggggcagcgtaacgagcaag
gagtcaagaccaaaggcttcgcaattcggcatggtcataccgaagagacctcctggtcca
acctgtggcgtcagcacgatacaaggatccccagatactaccgataatcatggatattca
tatcaacctcaagcctacttccctcaacaggatagttatccagattcaccgatgtttagt
ccccgtgggacacctataaacgtacctgatccagttatccgaatgttcggtgaaatggta
tacacgagagtgttcgggaactcagttaccaacttctatacatacccaaattcgtacaat
ctagcaaggagtactagtcctaggattagaaggcacgtaatgcaagccgataaatcgctc
ggcagaataagttttttcctattctgttgcatattcctttgccttcttttgttctga

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