Gossypium hirsutum (upland cotton): 121228303
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Entry
121228303 CDS
T04793
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3-II-like
KO
K13148
integrator complex subunit 11 [EC:3.1.27.-]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ghi03041
]
121228303
Spliceosome [BR:
ghi03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
121228303
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Paralog
GFIT
Motif
Pfam:
Beta-Casp
Lactamase_B_6
RMMBL
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_2
ARM_7
Lactamase_B_3
Motif
Other DBs
NCBI-GeneID:
121228303
NCBI-ProteinID:
XP_040967682
UniProt:
A0ABM3BKT6
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All DBs
Position
A04:complement(88735495..88743557)
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AA seq
642 aa
AA seq
DB search
MAIDCLVLGAGQEVGKSCMVVSINGKRIMFDCGMHMGYTDSRRYPDFSLISKTGDFDNAL
TCVIVTHFHLDHIGALPYFTEVCGYKGPIYMTYPTKALAPLMLEDYRKNMDRRGEDEQFT
SDHIAECMKKVIPVDLKQTVQVDKDLQIRAYYAGHVIGAAMFYAKVGDAAMVYTGDYNMT
PDRHLGAAQIDRLQLDLLITESTYATTIRDSRYGREREFLKAVHNCVAAGGKVLIPTFAL
GRAQELCILLEDYWERMNLKVPIYFSAGLTIQANMYYKMLINWTSQKIKETYATHNAFDF
KNVRNFDRSLINAPGPCVLFATPGMIVGGFSLEVFMQWAPSENNLVTLPGYCVAGTIGHK
LMSGKPTKIDLDKDTQINVRCQIHQLSFSPHTDAKGIMDLVKFLSPKHAILVHGEKPKMA
TLKERIQSELGIQCYCPANNETVTIPSTHYVKADASGTFIRSCLNPNFKFSTRSSTDKSY
LDSNKSKAVSRLSVSDDRATEGILVVEKGKKAKVIHQDEILHMLGEKKHEIQFAYCIPMP
MARTEDLSSTSHMLCGFDKSTLISRLSMILSDELSEGNILDLGEELQVESFRVSVCSSDN
CPHRLSSSLQNGSESVFFCCNWSVADEKLAWKIISIMKNSTL
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcgattgcctcgtccttggggcaggccaagaagttgggaaaagctgcatggtg
gtctcgataaatggcaagcgaatcatgttcgactgtgggatgcatatgggatacactgat
tctcgccgatacccagatttctctctcatttctaagactggagatttcgataatgctctc
acctgtgtcattgttactcactttcatttggatcatattggagcacttccttatttcact
gaagtttgcggttataagggtccaatttacatgacttatccgacaaaagcattggcccct
ttgatgttggaggactacagaaagaatatggaccgaaggggcgaggacgaacagtttact
tctgatcatattgcagaatgcatgaaaaaggttataccggtggatttgaagcagactgtg
caggttgataaagatcttcaaatccgtgcctactatgcaggacatgttattggggcagca
atgttttatgcgaaggtgggagatgctgctatggtgtacacaggagattataatatgacg
ccagatagacatcttggggcagctcagattgatagactacagttggatcttctcataaca
gagtctacttatgcaacaaccatacgtgattcaagatatgggcgagaaagggagttcctt
aaagctgttcataattgtgttgctgctggaggaaaagtgcttattcctacttttgctcta
ggaagagctcaggaactttgtatattgttggaagattactgggaacggatgaatctaaaa
gttcctatctacttctcagcaggtttgacaatccaagccaatatgtattataaaatgctt
attaactggacgagccagaagatcaaggagacgtacgccacacataatgcatttgatttt
aaaaatgttcggaattttgaccgttctttgataaatgctcctggaccttgtgttctcttt
gctacacctggtatgattgttggtgggttttcactcgaggtttttatgcagtgggcgcct
tcagaaaacaatcttgtgacgttgcctgggtattgtgtggctggaaccattggccataag
ttaatgtctggtaaaccgaccaaaattgatttggacaaggacactcaaatcaatgtgcga
tgccagattcatcagctatctttcagtcctcataccgacgccaagggtattatggatctt
gtcaaatttctctcacccaaacatgctatacttgtacatggtgagaagccgaaaatggcc
actcttaaagaaaggattcagtctgaacttgggatccagtgttattgtcccgcaaacaat
gaaacagtcaccattccttcgacacactatgtgaaagcagatgcttcaggtacctttatc
cgaagttgcttgaacccaaacttcaagttctcaacacgtagttcaaccgataaatcttat
ttggattcaaacaaatcaaaggccgtttcaaggctttccgtaagtgatgatagagctaca
gaaggtatcttagtagtcgaaaaaggcaaaaaggcaaaagttatacaccaagatgagatt
ctacatatgttgggagaaaaaaagcatgagattcagtttgcttattgtatcccaatgcct
atggcccgaaccgaagacctctcttccacttcccatatgctctgcggttttgacaaaagc
actttgattagtcgattatcaatgatactatcggatgaactttccgaaggtaacatactg
gatttaggggaagaacttcaagtagaatcattccgtgtatctgtttgttcgtcggataat
tgtcctcatagattatctagtagtcttcagaatggttcggaatcagtgttcttttgttgt
aattggtcagtggctgacgaaaaacttgcatggaaaatcatttcaatcatgaaaaattct
actttataa
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