Gossypium hirsutum (upland cotton): 121229699
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Entry
121229699 CDS
T04793
Name
(RefSeq) DNA gyrase subunit A, chloroplastic/mitochondrial-like isoform X1
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ghi03032
]
121229699
03400 DNA repair and recombination proteins [BR:
ghi03400
]
121229699
Enzymes [BR:
ghi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
121229699
DNA replication proteins [BR:
ghi03032
]
Prokaryotic type
DNA Topoisomerases
121229699
DNA repair and recombination proteins [BR:
ghi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
121229699
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
alpha-hel2
DUF5475
Motif
Other DBs
NCBI-GeneID:
121229699
NCBI-ProteinID:
XP_040970466
UniProt:
A0ABM3BTT3
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All DBs
Position
A05:complement(108504573..108524405)
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AA seq
961 aa
AA seq
DB search
MNSLSSSPTPSISPSMSLSATLRVSSFLRHNLFLAPSRASALRRNVSHLRFLSSSPSRRT
VHHPVKARRGGGQEDDSGLGNGSLMAVVKDGTGDGRDGRVLPFELHKEAMDSYMAYALSV
LLGRALPDVRDGLKPVHRRILYAMHELGLSSRKPFKKCARVVGEVLGKFHPHGDNAVYDS
MVRMAQDFSLRFPLIQGHGNFGSIDADPPAAMRYTECRLEALTEAILLADLEQDTVDFVP
NFDNSQKEPSLLPARLPTLLLNGSSGIAVGMATNIPPHNLGELVDVLCALIRNPEASLQE
LLEYMPGPDFPTGGLIMGNLGILAAYRTGRGRIVVRGKADIELLDSKTKRSAVIIKEVPY
QTNKSSLVEKIAELVESKTLEGINDIRDESDRSGMRVVIELKRGADPSIVLNNLYRLTAL
QSSFNCNMVGILDGQPKQMGLKELLQAFLEFRCSVVERRARYKLSQAQDRRHIVEGIVVG
LDNLDRVIDIIKDAKGNAAASAGLKEEFNLSDKQADAVLDISLRRLNLLERKKFVDESAS
LMEQISKLTELLSSQKNILQLIEQEALELKNKFSSPRRSILDDSDGGLLEDIDIIPNEEM
LLAFSEKGYVKRMKPSTFNLQNRGTIGKSVGKLRVNDAMSDFIVCRSHDHVLYFSDRGIV
YSAYAYKIPESSRTAAGTPLIRIISLSEGERITSIVPVSEFAEDQFLVMLTVNGYIKKVS
LNYFSAIRSTGIIAIQLVPGDELKWVRCCTNDDLVAMASQNGMVILSSCDIIRALSRNTR
GAIAMRLKEGDKMASMDIIPAPRHTDLDKTAEDSISYDKGGSGPWLLFISENGYGKRVPL
SSFKQSPLNRVGLIGYKFSSEDRLVAVFVVGFSLTEDGESDEQVVLVSQSGTVNRIKVRD
ISIQSRYARGVILMRLEHAGKIQSASLISASAEEAAELLPGMQSEEATTNAGTAEGISMA
S
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atgaattccttatcttcttctcccactccctcaatctcaccttcaatgtctctctccgct
acactccgcgtctcttctttcctacgccacaacctcttcctcgccccttctcgcgcctcc
gccctccgtcgtaatgtctcccacctccgtttcctctcatcgtccccttctcgtcgtacc
gtacaccatcccgtcaaagcaaggcgcggcggggggcaggaggacgacagtggactagga
aatggaagcttgatggccgttgtcaaagatggaaccggcgatggccgagatgggcgggtt
cttcccttcgagcttcacaaggaggctatggactcatatatggcttacgcattatccgtg
ttgcttggacgggctttgcccgatgttagagatggtttgaagccggtgcataggagaatc
ctgtacgcaatgcatgaattaggtctttcgtctagaaaaccattcaagaaatgtgctaga
gttgttggtgaggtcctcggtaagtttcatcctcatggggataatgcagtatatgattcc
atggtgcggatggcacaggatttttcattgaggttcccgcttatccaaggacatggaaat
tttggttcaattgatgctgatcctcctgctgccatgcgttacactgagtgcagacttgaa
gcactcacagaagcaattcttctggcagatctggaacaagatacggttgattttgttccg
aactttgataattcacaaaaagaaccatcacttctgcctgctagactaccaacattgttg
ctgaatggttcctctgggattgcggttggcatggcaactaacattcctcctcacaatctc
ggagagttggtagatgtgctctgtgcattaattcgtaatccagaggcctcattacaagag
ttgttggaatacatgcctggacctgactttccaactggagggctgataatgggaaacctt
gggatcttggcagcatatcgaactgggcgagggcgtattgtagttagaggaaaggctgac
attgaactgcttgactctaagaccaagagaagtgcagttattattaaagaggttccttat
cagacaaacaaatcctcgcttgttgagaagattgctgaacttgttgagagtaagactcta
gagggtatcaatgatattcgtgatgagagtgatcgctctggaatgcgtgtggtcattgag
cttaaaaggggagctgacccatctattgtgctgaataacctttaccgtctcactgctctt
cagtctagtttcaactgcaatatggtgggtattcttgatggacagccaaagcagatgggc
ctgaaagagttgcttcaggcatttttagaatttagatgctctgttgttgagagacgtgcg
aggtacaagctttcacaagctcaagatagaaggcatattgtggagggtattgtggtaggg
cttgataatttggatagagtaattgatataatcaaagatgctaagggcaatgcagctgca
tcagctggcctgaaggaggaattcaatctttctgacaagcaagcagatgccgtattggat
ataagcttacgacgacttaaccttcttgagcgaaaaaagtttgttgatgaaagtgcatca
ttgatggaacaaatttcaaagttaacagaactgttatcaagccaaaaaaatatattgcag
ctaatagaacaagaagcacttgagctaaagaacaagttttcgagtcctcgacgttcaata
ctggatgattcagatggtggcctacttgaagacatagatattattccaaatgaagaaatg
ctgctggcatttagcgaaaaaggttatgttaaacggatgaagccgagcacttttaatctt
caaaaccgtggaacaattggtaaatctgttggaaaacttcgtgtaaatgatgcaatgtct
gacttcatagtttgccgttcacatgaccatgtgctgtatttcagtgataggggaatagtg
tactcagcttatgcatataaaattccagaaagtagccggactgctgctgggacgcccctg
atccggatcatatctttatctgaaggcgagagaataacgtcaattgttcctgtcagtgag
tttgcggaagaccagtttctagtgatgcttacagtgaatggctacatcaagaaagtatcc
ctaaattacttctcagctattcggtccactggaatcatagccattcaattggttcctggt
gatgagttaaagtgggttcgttgttgcacaaatgatgaccttgtggccatggcttcacaa
aatggaatggtcattctaagttcctgtgacattatccgagcactaagcagaaacaccaga
ggagctattgccatgagactgaaagaaggagataagatggcaagcatggacatcatacca
gctccaaggcatacagatttggataagacagcagaagattccattagctatgataagggt
ggcagtggtccgtggctcttgtttatctctgagaatggctatggaaagcgagttcctttg
agtagcttcaaacagtcgcctttgaacagggttggtttaataggatacaagttctcttca
gaggatcgcttggtagctgtctttgtggttggcttttcattgacagaagatggtgaaagt
gacgagcaagtggtgctagtcagccaaagtggtactgttaatagaattaaagttcgggat
atctcaatacagtctcgttatgcaaggggggttattctaatgcgactagagcatgccgga
aagattcaatcagcatcactaatctcagcctcagcagaagaagcagcagagttgctaccc
ggtatgcagtcagaagaagcaacaactaatgcaggaacagctgagggcatatctatggca
tcataa
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