Gossypium hirsutum (upland cotton): 121230661
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Entry
121230661 CDS
T04793
Name
(RefSeq) E3 ubiquitin-protein ligase AIP2-like
KO
K16274
E3 ubiquitin-protein ligase AIP2 [EC:
2.3.2.27
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
121230661
Enzymes [BR:
ghi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121230661
Ubiquitin system [BR:
ghi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121230661
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-C3HC4_3
zf-ANAPC11
zf-RING_5
zf-RING_UBOX
zf-RING-like
zf-RING_16
Prok-RING_4
zf-HC5HC2H
DUF4882
Motif
Other DBs
NCBI-GeneID:
121230661
NCBI-ProteinID:
XP_040971725
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All DBs
Position
A06:complement(24659880..24661641)
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AA seq
314 aa
AA seq
DB search
MGSSSCSDGSLKQQLEELQKQLGKKQRFEEAVSSINSLLKLHYPSASPSLRKSFYSIVCR
VATILKTRYTAPGFWLAGLRLFELLEPLVSDTSEKSHLRNCISQAKQHLNEIENPVQSSE
SSANRGYLFEGHLTVDPEPPQPQWLVQSNLMNAFASAAAAESSQGSATNVNTVENAANVL
EQLIDHLDSVIPEILENEGGVRRVPPASKEVVAKLPVITLTEEILAKLGSDAECAICKEN
LLVGDNMQELPCKHTFHPPCLKPWLDEHNSCPICRYELQTDDHDYESWKEREKEAEEERK
GAANAVRGGEYMYV
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggggtcttcttcttgttcagatggaagcttgaagcaacaattagaggaattacagaaa
cagcttggaaagaaacagagattcgaggaggcagtttcctccatcaattcccttcttaaa
ctccattatccttcagcttctccctcccttcgcaaatcgttttattccattgtttgccgt
gttgctaccattttgaagaccagatacaccgcacccggtttctggcttgccggtttacgc
cttttcgaactcttggaaccccttgtctctgatacttctgaaaagagtcatctaaggaat
tgcatttctcaggctaagcaacacttgaatgaaatcgaaaaccccgtccaatcatctgaa
tcttccgccaacagaggttatctatttgagggacatcttaccgtggatcctgaaccacca
caacctcaatggttggtccaatcaaatctcatgaatgcttttgcttctgctgcggctgcc
gaatcttctcagggttcggccacaaatgttaacacagtggaaaatgctgccaatgtgctt
gaacagctcattgatcatcttgatagtgttataccagagatacttgagaatgagggtggt
gttcgaagagtcccaccagctagtaaagaagttgtcgcaaagcttccagtaattactctc
acagaagaaatcctggctaagcttggatctgatgctgaatgtgcaatatgcaaggagaac
cttcttgttggtgataacatgcaagaattgccgtgcaagcacacattccatcctccttgt
ttaaagccatggctggatgaacacaattcttgcccaatttgtagatacgagctgcaaaca
gatgaccatgattatgagagctggaaggagcgggaaaaggaggccgaagaagagagaaaa
ggtgctgcaaatgctgttcgtggtggtgaatacatgtatgtgtag
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