KEGG   Gossypium hirsutum (upland cotton): 121230850
Entry
121230850         CDS       T04793                                 
Name
(RefSeq) ras-related protein RABF2b-like
  KO
K07887  Ras-related protein Rab-5A
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi04144  Endocytosis
ghi04145  Phagocytosis
ghi04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    121230850
   04145 Phagocytosis
    121230850
   04148 Efferocytosis
    121230850
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ghi04131]
    121230850
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ghi04147]
    121230850
   04031 GTP-binding proteins [BR:ghi04031]
    121230850
Membrane trafficking [BR:ghi04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    121230850
 Endosome - Lysosome transport
    121230850
Exosome [BR:ghi04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   121230850
  Exosomal proteins of other body fluids (saliva and urine)
   121230850
  Exosomal proteins of colorectal cancer cells
   121230850
  Exosomal proteins of bladder cancer cells
   121230850
GTP-binding proteins [BR:ghi04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    121230850
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU RsgA_GTPase MMR_HSR1 Gtr1_RagA AAA_24 AAA_22 AAA_16 TsaE
Other DBs
NCBI-GeneID: 121230850
NCBI-ProteinID: XP_040972290
UniProt: A0ABM3BZ10
LinkDB
Position
A06:126921374..126925116
AA seq 200 aa
MATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTVAVNDATVK
FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQSQGNPNMVTAL
AGNKADLLDARKVTSEEANKYAQENGLFFMETSAKTASNVNDIFYEIAKRLPRAQPAQNP
AGMVLMDRPTERTASASCCS
NT seq 603 nt   +upstreamnt  +downstreamnt
atggccactactggaaacaagaacatcaatgctaaattagttctacttggggatgttgga
gctgggaagtcgagtctcgtattacgctttgttaaagggcaattcgttgaatttcaggaa
tcgaccattggtgcggcttttttctcccaaacggtggctgtgaatgatgcaacggtcaag
tttgagatttgggataccgctggtcaagagagataccatagcttggcaccaatgtattac
agaggagctgcggctgcgatcattgtttatgatataacaaatcaagcatcgtttgagaga
gccaaaaaatgggtccaggaacttcaatcgcaaggcaatccgaatatggtaacggcactt
gccgggaacaaagctgatttacttgatgcaaggaaggtgacatcagaggaagcaaataag
tacgctcaagagaatggtcttttcttcatggaaacttctgcaaagaccgcatccaacgtc
aacgatattttctatgaaatagctaaaagattacctcgagcacaaccagcacaaaaccct
gccggaatggttctcatggatagacctacagaacggacggcaagcgcatcatgttgctcg
tag

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