Gossypium hirsutum (upland cotton): 121230892
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Entry
121230892 CDS
T04793
Name
(RefSeq) protein FRIGIDA-ESSENTIAL 1-like isoform X1
KO
K27809
protein FRIGIDA-ESSENTIAL 1
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ghi03000
]
121230892
Transcription factors [BR:
ghi03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
121230892
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Torus
zf_CCCH_4
zf-CCCH
zf-CCCH_2
Halogen_Hydrol
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
121230892
NCBI-ProteinID:
XP_040972357
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All DBs
Position
A06:complement(127499452..127503363)
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AA seq
762 aa
AA seq
DB search
MSSSTSAAVPRAGNDDEIRAASIMEREINSSDMEIDDDDENEEDLQSSSNRNDAGNVVES
RGHDGQLGSDLSSTPGNCEPRIPAKTLNVGEGSSNFEFSLCTNYVGSKYSVSGKEPAKEN
GIQEYIGNGKDSRNMLERKASQDYPDQHTNGKGHFVVDESNSLPVGYHSGGVNNDLGFEE
KNKQMDVQTDDDKRKIKSRFHRSAAPQTSAGSLSPSSNSENKRPALICDFFARGWCIKGS
SCRFLHIKDGGKNPGQLPEEDTAAADGKRAVELDEGFRSAAERSRSPASADALPSSVVNK
TGLSSHFFSERILPLGHDENQRLHLFHEMNKFPLLQSKDKSLGTAPASQWFSASTDDFGP
SKDVRQNGIGQNLPVSLSDRSTFGNGFLPEYKSSLSGSVTSLGDIYSENQSHHVSTHLVS
LPLNFSLSACSLGAQKMLDSDRGRHTSKLSSLLQGPFPFSSSKPEKFLVNDIASDPLHFP
ENRIKISSDDWEPSVPFRPSFFVTSGISSPRSEYDPLRDSIDVSNAGERPLKFSFSNQGP
SLLNVADPPTYGNSASRRPLLPECNDDKRTASCHNGDHENLVNNNCNPSGKDSLTTDAND
GTSAVDMQNGTLVKEEISSVASHDKDISKANKNDRDHDGRHRRGRSRCKKDLEVDRAREK
NEIDVEVEHKADGDYKESKAMRHFHAALVDLIKELLKPTWREGHLSKDAHNTIVKKAVDK
VFGSIQPHQLPVTFESVKQYLSSSQPKITRLVEGYIEKYKKS
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcgtcaacttctgccgccgtcccacgcgccggtaacgacgacgaaatccgcgcc
gcctcaattatggaacgagaaattaacagttccgatatggaaatagatgatgatgatgaa
aacgaagaggatttgcaaagctcttcgaatcgaaatgatgctggtaatgttgtggagtcc
agggggcatgatggacaactcgggtcagatttgtcaagtactcctggaaattgcgagcca
agaataccggctaaaacccttaatgtaggagagggtagttctaattttgaattttctcta
tgcacaaactacgtgggttccaagtattcagtatctggaaaagagcctgcaaaggaaaat
ggcattcaagaatatattggcaatggaaaagattctcgtaacatgttagaaagaaaagcc
tctcaagactaccccgaccagcatactaatggcaagggccattttgttgtcgatgagagt
aattcactcccagttgggtatcactcaggaggagttaataatgatctaggttttgaggaa
aaaaataagcaaatggatgtgcaaacagatgatgataagaggaagataaaatcaaggttt
cacagatctgctgctcctcagacaagtgccggaagtctatcacctagcagtaatagcgag
aacaaacgccctgcacttatatgtgacttttttgctagaggttggtgtatcaaaggaagt
tcatgtagatttcttcacataaaagatggtgggaaaaatcctggacaactgcctgaagaa
gatacagctgcagcagatgggaaaagagctgttgagcttgatgaaggttttagaagtgct
gctgagagatcaagatcacctgcttctgctgatgcactgccttcgtcagttgtaaataag
accggattgtcttctcatttcttttcagaaagaatcctgccattggggcatgatgaaaac
caaagattacacttatttcatgaaatgaataagttccctttactccaaagtaaagataaa
tctttgggcactgcccctgcctctcagtggttttctgcatctacagatgatttcggacca
tctaaggatgtaaggcaaaatggtataggtcagaacttgcctgtttcactgagtgataga
tctaccttcgggaatggttttcttcctgaatataaatcatcattgagtggctcagttaca
tcattgggcgatatatatagtgagaaccaatctcatcatgtctcaacacacctagtatca
ttgcctttaaatttttctttgagtgcatgctctcttggagctcaaaagatgttggacagt
gaccgcgggcgtcatacttccaagttgtcttctttgctgcaaggcccttttcccttctct
agttctaaaccagaaaaatttctcgtaaatgatattgccagtgatccattgcactttcca
gaaaatagaataaaaatatcttcagatgattgggagccatcagtaccctttcggccatcc
ttttttgtcacctctggtatatcatccccacgaagcgaatatgatcctcttcgtgacagc
attgatgtgtccaatgcgggagagaggccacttaaattttctttctctaatcagggtcca
tccctcttgaatgtagcagatccaccaacatatggcaactctgcatcaagaaggccactg
ctccctgaatgtaatgatgataaaagaactgcatcttgtcataatggagaccatgaaaac
ttggtcaacaataattgcaacccttctggaaaagattcactaacaactgatgcaaatgat
ggaacttctgctgttgacatgcaaaatggaacactagtgaaagaagagatttcctcggtt
gcttctcatgacaaagacatttcaaaggcaaacaaaaatgatagagatcatgatggcaga
catcgaagaggcaggtctagatgcaaaaaagacttagaagtagatagggctagagaaaag
aatgaaatagatgttgaggttgagcataaggcagatggggattataaagaatcaaaagca
atgaggcatttccatgctgctcttgtagatttaattaaggaactgttgaaaccaacttgg
cgtgagggtcatctcagtaaagatgctcataatacaatagtcaaaaaagcagttgacaaa
gtttttggcagcatacaacctcatcagcttccagttaccttcgagtcagttaagcaatat
ctttcttcatcccaaccaaaaataacaagacttgttgagggatatatcgaaaaatacaaa
aaatcttga
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