Gossypium hirsutum (upland cotton): 121230915
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Entry
121230915 CDS
T04793
Name
(RefSeq) uncharacterized protein LOC121230915
KO
K19619
tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ghi03400
]
121230915
DNA repair and recombination proteins [BR:
ghi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
121230915
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-GeneID:
121230915
NCBI-ProteinID:
XP_040972398
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All DBs
Position
A06:127797558..127799712
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AA seq
446 aa
AA seq
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MAFAFAPLRFLTLNPRPIIIISKTLNFPPFPSPNFNPNPKTMSWSCAKCTFLNSPSQTAA
CKVCLSPPSPSPSSPSKWACKACTFLNLYNKSNCEICGTRSCLSSFDDLKVTNFNDESDS
SVGSVFLPLKPCNKRKIREPNLGNEDCIELGGFRGIKASNKAVQIEGSNSGSIKASLKIL
SYNIWFREDLEVHKRMKAIGDLIQLHSPDIICFQEVTPMIYDIFRGSNWWKGYRCSISDD
TASLRAYFCIQLSKFPVKSFRREPFDNSIMGRELCMTEVEVSGGETTLVVATTHLESPCP
APPKWDQMYSKERVEQAKVAINILENKPNVIFGGDMNWDDKLDGQVPLTDGWIDAWNELR
PAEDGWTYDTKSNQMLSANRTLRKRLDRFLCKLNGFKVCAVEMIGVEPIPGLSYTKEKNV
RKEKKLLELPVLPSDHYGLLLTISSQ
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggcgtttgcatttgcaccacttcgattcttaacgttgaaccctagacccatcatcata
atctcaaaaacccttaatttccccccttttccatccccaaatttcaaccccaatccaaaa
accatgtcttggtcttgcgccaaatgcactttcctcaactccccatcccaaaccgccgct
tgcaaagtctgtctctcacctccgtcaccgtcaccgtcttcgccgtctaaatgggcttgt
aaagcttgcacttttttgaacctttacaacaaatccaactgtgaaatctgtggtacaagg
tcttgtctttccagtttcgatgatttgaaagttactaactttaacgatgaatccgattcc
tctgttgggtctgttttcttgcctttgaagccttgtaataaaaggaagatcagggaacca
aatctgggtaatgaagattgtatcgaattgggtggttttcgtggcattaaagcctccaat
aaagctgttcaaatagagggtagtaattcaggatccattaaagcttcattgaagatattg
agctacaatatttggtttagggaagatttagaggttcacaagaggatgaaagctattggt
gaccttattcaacttcattcccctgatatcatttgttttcaagaggttactccgatgatt
tatgacatttttcgtgggtctaactggtggaaagggtaccggtgctctatctcagacgac
acggcgagtttgagagcttacttttgtatacagttaagcaaattccctgtgaaatccttt
cgtcgtgaaccttttgataattcgataatggggcgagaactttgcatgactgaggttgaa
gtttctgggggtgaaacaacgcttgttgttgctactacccatctcgagagtccgtgtcct
gctccgccgaaatgggatcaaatgtatagtaaggaacgtgtagaacaagcgaaagtagcg
atcaatattctcgagaataagccgaatgttatttttggtggtgatatgaattgggatgac
aaattagatggtcaggttcctttaactgatggatggattgatgcttggaacgagttaagg
cctgctgaagatggatggacgtatgataccaaatcaaaccagatgttatcggcaaatcgt
acattacgaaaacgactagatcgctttctatgcaagctgaatggttttaaagtctgtgca
gtcgagatgatcggggtagagccaataccaggtttatcatataccaaggagaagaatgtg
aggaaagagaagaagttattggaacttcctgttttgccaagtgatcattatggcttgctt
ttaacaatctcaagtcagtaa
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