Gossypium hirsutum (upland cotton): 121231814
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Entry
121231814 CDS
T04793
Name
(RefSeq) nuclear pore complex protein NUP133-like
KO
K14300
nuclear pore complex protein Nup133
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121231814
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
121231814
03036 Chromosome and associated proteins [BR:
ghi03036
]
121231814
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
121231814
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
121231814
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_N
Nucleoporin_C
Motif
Other DBs
NCBI-GeneID:
121231814
NCBI-ProteinID:
XP_040972535
UniProt:
A0ABM3BZR5
LinkDB
All DBs
Position
A07:complement(90988338..90996291)
Genome browser
AA seq
1325 aa
AA seq
DB search
MFSPGLKRSKLSSQKERNVGANLRAPDSPSTPLTENNKPAHQASIPDRPSTGTPAPWAPR
LSVLARIPPANKNEKGDGVDPIKPVFVGEFPQVVHDEQTSFLQRRVPADVCISGGMDKGT
CLSWIIYGNKIFIWSYLSSTAPKKCVTLELPSDVLGNADLGRTSYIRNNWLLSVVNWDST
SKVSNRAAKHCYSAGIVLCNQKTRAVLYWSDIFADVGAASVTICSSSDELLVTSSRIDSN
ATPNRHATNFTGSSSFNSLIASAIPGTQNACVALACCSSGELWQFYCSPNGIQVNKVHQN
IQSLSSQGAGVGQLVGSKGYPRSMIWRLPYFSVSDSNRQFFLLTDHEIQCFNIKLFPDLE
VSKLWSQEIVGNDGDLGIKKDLAGQKRIWPLDLQVDDHGKVITVLVATFCKDRVSSSSYT
QYSLLTMQYMSEVNIFSDLHERVLEKKAPIQVIIPKARVEDEDFLFSMRLRVGGKPAGST
IILSGEGTATVSHYHRNSTRLYQFDLPHDAGKVLNASVLPATDDGEDGAWVVLTEKAGIW
AIPEKAVVLGGVEPPERSLSRKGSSNEGSAQEERRNLMFANNIAPRRASSDAWDAGGRQA
TGLTGITRRTAQDEESEALLGQFFHEFLITGKVDGSLEKLKSSGAFERGGETNVFVRTSK
SIVDTLAKHWTTTRGAEIVAMGIISTQLMDKQQKHNKFLQFLALSKCHEELCSGQRHSLQ
IILEHGEKLSAIIQLRELQNIINQNRSTGVGSTHSSFENQVSGALWDLIQLVGERARRNT
VLLMDRDNAEVFYSKVSDLEQVFYCLERHLEYIISMEQPVGFQIHKACELSNSCVTIFRA
AMDYKNENHLWYPPPEGLTPWYCQPVVRNGLWSIASFMLQLLKETSEIDMSAKSELYSHL
EALAEVLLEASSGAINAKVERGEEHKGLLNEYWSRRDAILDSLYQQVKGFVEAGYQDLTD
NTGENKEEILKNLSSSLLSIAKRHEGYQTMWNICCDLNDSGLLKNLMHESMGPRCGFSYF
VFKQLYGKKQYSKLLRLGEEFQEELSIFLNHYQDLLWLHEVFLHRFSAASETLHVVALSQ
DEGSISITEEEIDSDHPNPVPTLTDRRRLLNLSKIAAFAGKDADSQIKAKRIEADLKILR
LQEEIMEVLPLDDTNQHVEKKLLRPEELIELCLESGSKELALQVFDVFAWTSSSFRKSHR
NLLEECWKKAADQDPWSELYQASVSEGWSDEETLQQLSRTILFKASNRCYGPKAETIDDG
FGEVLPLRQENVEVAGLKDTRSSVEAILMQHRDFPYAGKLMLTALMLGCVQGDDVKLEES
LSPMV
NT seq
3978 nt
NT seq
+upstream
nt +downstream
nt
atgttctccccaggattgaagcgaagcaaattaagctcgcagaaggagagaaatgtaggg
gcaaatctaagggcaccagattctccttcaactccacttacagagaacaataaaccagcg
caccaagcttcgattccagatcgcccaagtaccggcactcccgctccttgggctcctcgc
ttgtctgttcttgccagaattccaccagcaaacaagaatgaaaaaggggatggggtggat
ccaattaagccagtttttgttggagagtttccacaagttgttcatgatgaacagaccagc
tttttgcagaggcgtgttcctgctgatgtttgtatatcaggcggaatggataagggaaca
tgcctatcatggattatatacgggaacaaaatttttatctggagttatttgtcatccaca
gctccaaagaaatgtgttactcttgaacttccctctgatgttttaggaaatgcagatctt
ggcagaacttcctatatccgcaataattggttgctttctgttgtcaattgggatagcacc
tcaaaagtatcaaatagagctgcaaaacattgctattctgctggtattgttttgtgtaac
cagaaaactcgagctgttttatactggtccgacatctttgctgatgtgggagctgcttct
gttaccatttgttcatcttctgatgaattattggtaacttcttcacgtattgacagcaat
gccaccccaaacaggcatgcaacaaattttactggctcaagttctttcaactctttgatt
gcttctgcaattcctggtacccaaaatgcctgtgttgcccttgcatgttgctctagtggt
gaactttggcaattttactgcagcccgaatggtattcaagtaaataaagtacaccagaac
atacaaagtttatcatcccaaggtgctggtgttggtcaacttgttgggagcaagggatat
ccgaggtcaatgatatggcgtcttccatacttttctgtttcagactccaaccgccaattt
tttctgctgacagatcatgaaatacagtgtttcaacatcaagctctttcctgatttagag
gtgtcaaagctttggtctcaggaaattgttggtaatgatggtgatttgggaattaagaag
gatctggctggacagaaacgaatctggcctctagacctgcaggtggatgatcatggtaaa
gttattactgttcttgttgccaccttttgcaaggatcgggttagcagctcaagttacact
caatattctcttctgaccatgcaatatatgtctgaagtgaacatcttctctgatttacat
gaaagagttttagagaaaaaggctccaatccaagtgataataccaaaagcaagggtagag
gatgaggacttcttattctccatgagacttcgagtagggggcaagcccgcaggatcaaca
atcatactttctggtgaaggaactgcaacagtctcccattatcacagaaattctactcga
ctctatcaatttgatttgcctcatgatgctgggaaagttcttaatgcttcggttcttcct
gctactgatgatggggaagatggcgcatgggttgtgcttaccgagaaagcagggatatgg
gcaataccagaaaaggctgttgtacttggtggggttgaaccccctgagcggagcttgtca
cgcaaagggagctcgaatgaaggctctgcacaagaagagagaaggaaccttatgtttgca
aacaatattgctcctagaagggctagttcagatgcatgggatgctggtggtagacaagca
actggtttgactggtattacacgcagaactgcccaagatgaagaatcagaagctttgcta
ggtcaatttttccacgagtttttgataactgggaaggttgatggatcactagaaaaactt
aagagttctggggcatttgaaaggggtggagaaactaatgtctttgtacggacaagcaaa
tcaatcgttgacaccttagctaaacactggacaactactagaggtgctgaaattgttgct
atgggtattatatcgactcaactcatggataagcagcagaagcataacaaatttctccag
tttcttgctttatccaagtgccatgaggagttatgttctggacagagacattctttgcaa
atcatcttagaacatggtgaaaagctctctgcaattattcaactcagggaactacagaat
ataattaaccaaaaccgttcaactggagttggctccactcattcaagttttgaaaatcaa
gtttcaggtgctctttgggatctgattcagttagtaggggagagggccaggcgaaatact
gtccttctgatggacagagataatgctgaagtgttctatagtaaggtctctgatctcgaa
caagtattttattgcttagaaagacatctagaatatataatcagcatggagcaaccagtt
ggatttcagatccataaagcttgcgaactctcaaattcatgtgttactatatttcgggct
gccatggactacaagaatgagaatcacctatggtatccaccaccagagggtttaacgcct
tggtattgtcaaccagtggtgcgtaacgggctgtggagtattgcgtctttcatgcttcag
ctgttaaaagaaacatctgaaattgatatgtcagcaaaatcagaattatattctcatctg
gaagcattggctgaagttcttcttgaggcgtctagtggtgctataaatgctaaagttgag
cgaggagaagagcacaaaggtcttctgaatgagtactggagtagaagggatgcaattctt
gattccctttatcaacaagttaaaggttttgtagaagctggttatcaggacttaactgat
aacacaggagagaataaagaagaaatccttaaaaatctgtcttcaagcttgctgtcaata
gcaaaacgacatgaaggctatcagaccatgtggaacatatgttgtgatctcaatgattca
gggttgctaaaaaatcttatgcatgagagcatgggacctagatgtggattcagttacttt
gtgtttaaacagctgtatggaaagaagcaatactctaagctactaaggcttggggaggaa
ttccaggaagagctatctattttcttaaatcattaccaggatctcctatggcttcatgaa
gtattccttcatcggttttcagcagcttcagaaactcttcatgttgtggctctttctcaa
gatgagggctctatttcaatcactgaagaggagatcgattctgaccacccaaatccagta
ccaacattgactgacaggcggcgacttttgaacctctccaagattgctgcctttgcaggt
aaagatgctgactctcagataaaagcgaaaagaatagaagctgatttgaagattttgaga
ttgcaggaagaaattatggaagttctaccactggatgacacgaaccaacatgttgaaaag
aagcttcttcgtcctgaggagctcatagagctgtgtctcgaaagtggaagcaaagagcta
gctttgcaggtttttgatgtatttgcatggactagctcatcatttcgcaagagccatagg
aaccttttggaggagtgctggaagaaggctgccgatcaagacccttggagcgagctatat
caagcatcagtatccgaaggttggagcgacgaggaaactttgcaacaacttagccgaact
atccttttcaaggcttcaaacaggtgttatggtccgaaagcagaaaccattgatgacgga
ttcggtgaagtgctgccattgagacaagaaaatgtagaagtagccggtttgaaagacaca
cgatcatccgttgaggcaatattgatgcaacatagggatttcccatatgcaggtaagcta
atgcttactgccctcatgctaggatgtgtacaaggtgacgatgttaaattagaagagagc
ctttccccaatggtatga
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