Gossypium hirsutum (upland cotton): 121231849
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Entry
121231849 CDS
T04793
Name
(RefSeq) CLIP-associated protein-like
KO
K16578
CLIP-associating protein 1/2
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ghi03036
]
121231849
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ghi04812
]
121231849
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
121231849
Cytoskeleton proteins [BR:
ghi04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
121231849
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
CEP104-like_TOG
HEAT_EF3_N
XMAP215_CLASP_TOG
HEAT
HEAT_EZ
Vac14_Fab1_bd
HEAT_2
TOR1L1_N
Cnd1
Adaptin_N
PDS5
MMS19_C
INTS1_R4
UTP20
HEAT_Maestro
TPR_TTI1_C
Dopey_N
HEAT_DAAF5
Rif1_N
MMS19_N
Npa1
SEN1_N
Motif
Other DBs
NCBI-GeneID:
121231849
NCBI-ProteinID:
XP_040972660
LinkDB
All DBs
Position
A07:complement(93916241..93926290)
Genome browser
AA seq
1439 aa
AA seq
DB search
MEEALELARAKDTKERMAAVERLYQLLEGSRKSLTSSEVTSLVDCCLDLLKDNNFRVSQG
ALQALASAAVLSGDHLKLHFNALVPAVVERLGDAKQPVRDAARRLLLTLMEVSSPTIIVE
RAGSYAWTHRSWRVREEFARTVTSSISLFASTELPLQRAILPPILQMLNDTNPGVREAAI
LCIEEMYTQAGTQFRDELHRHQLPGSMMRDINARLEKIEPQGRHSDGTLGGFATGEIKPA
VRNSKKSSPRAKSSSRETSLFGGESDITEKPIDPIQVYSDKELVREFEKIASTLVPEKDW
SIRIAAMQRLEGLVSGGAADYPSFRGLLKQLVGPLSTQLSDRRSSIVKQACHLLSFLSKE
LLGDFEACAEMFIPVLFKLVVITVLVIAESADNCIKTMLRNCKVARVLPRIADCAKNDRS
AVLRARCCEYALLILEHWPDAPEIQRSADLYEDLIRCCVADAMSEVRSTARMCYRMFSKT
WPVRSRRLFTSFDPAIQRIINEEDGGMHRRHASPSVRDRNVKMPISSQSSASAHLPGYQT
SAIVAMDRTSTLSSGTPLTSGLNLSQSKSLGKGADRTLESVLHASKQKVSAIESMLRGLD
ISQKQRSTSLDLGVDPPSSRDPPFPAVVPASNSLTSSLGLESTTSTVGKGSNHNGGLIMS
DIISQIQASKDSGKLSYRTSATTESLPAFISYSAKRASERQQRGSLEENIDIREARRSVN
PHVDRQYLDTPYRDVNSRDLQNNHVPNFQRPLLRKHVAGRMSAGRRKSFDDSQLSLGEMS
SYVEGPASLSDALSEGLSPSSDWSARVAAFTYLRSLLQQGPKGIQEVVQNFEKVMKLFFQ
HLDDPHHKVAQAALSTLADIIPSCRKPFESYMERILPHVFSRLIDPKELVRQPCSMTLEI
VSKTYSIDSLLPALLRSLDEQRSPKAKLAVIEFAITSFNKHAMNSEGSSNIGILKLWLAK
LTPLVHDKNTKLKDVAITCIISVYSNFDPTAVLNFILSLSVEKQNFLRRALKRYTPRIEV
DLINYLQNKKERQRKSSYDPSDVVGTSSEEGYIGVSKKSLLLGRYSAGSTDGDGGRKWGS
TQESTLITGNIGLATSDETQDNLFQNLETSSNTNVFPSKTKESSYMVNSICQTLGSQTGQ
IENLESSVNLEGLSTPHLEINGPSRFDTLETTEGATHNGTSSELDLNHLKPAAIKVRSMP
DTGPSIPQILHVICNGNDESPTASKHNALLQLYEISVANDLSVWTKYANQILTAVLEVLD
DSDSSIRELALSLIIEMLKNQKGVMGDSVEIVIEKLLHVMKDNVPKVSNEAEHCLNTVLS
EYDPFRCLSVIVPLLVTEDEKTSVICINCLTKLVGRLSQEELTAQLPSFLPALFEAFGNQ
SADVRKTVVFCLVDIYIMLGKSFLPHLEGLNSTQLRLVTIYANRISQARTGTPIDAGHE
NT seq
4320 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggcactggagttagcacgtgccaaagacaccaaggagcggatggcggcggtg
gagcggctctaccaactccttgaaggctctagaaagagtctcacttcttcggaagtcact
tcgcttgttgactgctgcttggatctcctgaaggacaacaattttagagtctctcaggga
gctctccaggctcttgcttccgccgccgttctttccggtgatcacttgaagttgcacttc
aacgctctcgttcctgcggttgttgaacggttaggtgacgccaaacaacctgttagagac
gctgccaggcgcctactgctcactctcatggaggtttcttccccaacgattattgttgaa
agagctggctcttatgcctggacgcatagaagttggagagttcgggaggaatttgcccgg
acagtcacatcatcaatcagtctttttgcatctactgaacttccacttcaacgggcgatt
cttcctcctattttgcagatgttgaatgacacaaatcctggtgttcgtgaagctgctata
ttatgcatcgaggaaatgtatacgcaagccggaactcaatttcgagatgaacttcatcgt
catcagcttcccggatctatgatgagagatattaatgccagactagagaaaattgagcca
caaggtcgacattcagatggaactttgggtggttttgctactggagagataaagcctgcg
gtacgtaattccaagaaaagcagtccaagagccaagagttcttcgagggagacatcactt
tttggaggtgaaagtgatatcactgaaaagccaatagatccaattcaagtttattcagat
aaggagctggtaagggaatttgagaaaattgcctctactcttgttccagaaaaagattgg
tccatacgcattgctgccatgcagagacttgaagggcttgtttctggaggtgctgctgat
tatccgtcttttcggggactcttgaagcagcttgttggcccactaagtacacagttatca
gataggaggtcaagcattgtgaagcaggcttgccatttgttatccttcttatcaaaggag
ctcttgggagattttgaggcatgtgctgagatgttcatcccagtacttttcaagttggtt
gtgattactgtgcttgtaattgcagagtccgcagataactgcatcaaaacgatgttgcgt
aactgcaaagttgcccgtgtgcttccccgcatagctgattgtgcaaagaatgaccgtagt
gctgtactccgtgccaggtgttgtgaatatgcattattgatacttgaacattggcctgat
gcaccagaaatacagagatcggctgatttatacgaggatctgattaggtgctgtgttgct
gatgcaatgagtgaggtacgatcaactgctagaatgtgctacagaatgttctccaaaact
tggccagttcgttctcgtcgcttgttcacctcctttgatcctgctattcaaaggataatt
aacgaagaagatggagggatgcataggcggcatgcttctccttctgtccgtgacagaaat
gttaaaatgccaattagctctcaatcttctgccagtgcacatctacctggatatcaaaca
tctgctatagttgccatggatagaacttcaactttatcctcgggcacacctctcacatct
gggttgaatctatcccaatcgaagtcccttggtaaaggtgctgaccggactttggagagt
gtgttgcatgcaagcaaacagaaagtcagtgccattgaaagtatgcttagaggtctggac
atatcccaaaaacagaggtcaacaagtttggatctaggagttgaccctccatcatctcgt
gatccaccattccctgccgttgttccagcttctaatagcctcacaagctctttaggacta
gaatcgactacctctactgttggtaagggtagcaaccacaatggtggtctgataatgtct
gacataatttctcaaattcaagcttccaaagattcaggcaagttatcatataggactagt
gcgacaaccgagtctttgccagctttcatatcatactctgccaagagggcatctgaaaga
caacaacgaggttcccttgaagagaacattgacattagggaggccaggcggtctgtaaat
ccacatgttgacaggcaatatttggacacaccttatagagatgtaaactctcgggattta
cagaacaatcatgttccaaacttccagaggccactattgagaaagcatgtagctgggcgg
atgtctgctggaaggagaaagagttttgatgatagccagttgtcacttggagagatgtca
agttatgttgaaggtccagcttctcttagtgatgccctaagcgaggggctcagtcctagt
tctgattggtctgccagggttgctgcttttacttatctccggtcattgttgcagcaaggc
ccaaaaggtattcaggaagtggttcaaaacttcgagaaggtaatgaaactgtttttccag
cacttggatgatccccaccataaagttgcacaggctgccctttcaacccttgctgatatt
attccatcgtgccgaaagccctttgagagttacatggaaaggatcctaccccatgttttc
tcacggttaattgatccaaaggagttggttaggcagccttgctcaatgacgttggaaatt
gtcagcaaaacctatagcatagattccctgttacctgctttgcttcgttcacttgatgaa
cagcgatcaccaaaggcaaaattggctgttatcgagtttgctattacttccttcaacaag
catgctatgaattctgaaggttctagtaatattggcatcttgaagttatggcttgctaaa
ctgacaccattggtccatgataaaaatactaagcttaaggatgtagctatcacttgcatt
atatctgtatactcgaattttgatccaactgctgttctgaattttattctcagtttatca
gttgaaaagcaaaatttccttagacgggcactcaaacggtacactcctcgtattgaggtg
gatctgattaactatttgcagaacaagaaagagagacagcgtaaatcatcctatgatcca
tctgatgttgttggaacttcatctgaagaaggatatattggtgtgtccaagaagagtctt
ttacttggaagatattctgctggttccactgatggtgatggtggtaggaagtggggttcc
acccaggaatcaaccctgatcactggaaatattggcctggcaacatctgatgaaacacag
gacaacttatttcagaacttggaaactagttcaaacacaaatgtttttccttccaaaacc
aaagagtcgtcttatatggttaattctatttgtcagactttggggtctcaaactggccag
atagagaacttagaaagtagtgtcaacttggaaggtctatctactccacatctggaaatt
aatggcccgagtagatttgacactttggagaccactgaaggagctacacataatggaaca
tcatcagagttggatcttaatcatcttaaacctgcagctataaaggttaggtctatgcca
gacacggggcccagcattcctcaaattcttcatgtgatctgcaatgggaacgatgagagc
cctactgccagtaagcacaatgcacttctgcaattatatgaaatttctgtggctaatgat
ctctctgtttggaccaagtatgccaatcagattttgacagctgtacttgaggttttagat
gattctgattcctcaatcagagagcttgccctgtcattgataattgaaatgcttaaaaac
cagaaaggtgttatgggagattctgttgaaatagtgatcgagaagctgcttcatgtaatg
aaggataatgttccaaaagtttcaaatgaagctgagcactgcttgaacactgtgttgtcc
gagtatgatccattcagatgtttaagtgttattgtacctttattagttactgaagatgag
aagacttcagttatttgcatcaactgtttaacaaagcttgtgggacggctatcacaggag
gaactaacggctcagttgccctcatttttgcctgctctttttgaagctttcggaaaccag
agtgctgatgtccgtaagactgtcgttttttgtttggtggatatttacatcatgcttggg
aaatcatttttgcctcacttggaggggcttaacagcacacaattgcggctggttacaatt
tatgccaatcggatatcacaggccaggaccggcacacctatagatgctggtcatgaatag
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integrated database retrieval system
