Gossypium hirsutum (upland cotton): 121231998
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Entry
121231998 CDS
T04793
Name
(RefSeq) LOW QUALITY PROTEIN: phospholipase D Y-like
KO
K16860
phospholipase D3/4 [EC:
3.1.4.4
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00564
Glycerophospholipid metabolism
ghi00565
Ether lipid metabolism
ghi01100
Metabolic pathways
ghi01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
121231998
00565 Ether lipid metabolism
121231998
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
121231998
Enzymes [BR:
ghi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.4 phospholipase D
121231998
Membrane trafficking [BR:
ghi04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
121231998
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PLDc_2
PLDc
PLDc_3
Motif
Other DBs
NCBI-GeneID:
121231998
NCBI-ProteinID:
XP_040973179
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Position
A07:complement(4117797..4132324)
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AA seq
514 aa
AA seq
DB search
MVLRYSIIVSFLLFLVVNLTHPRFTESLPRCKAWLVQSIPTDMPHLPPVPGVLSTGDVFK
WLAYNSTDKLDIIAQYWQLKAHPEDSRSGDYGYSKADMHRFGAHQGFSVYTALENAADRD
VDIRLVQHSGVYPDYTKEPSSLAARRPNVKSVTLLLDKWWGSGIVHAKVWISDNRDVYIG
SANNDWKSLTQVKEVGIYLVGCPKVARKVGVYFHNLWRLAHLDDSAYTTTILDQQWQIQR
KVPCWSHFIESDMRCTPQLPRFEEIPYVAGYPTLSDPKILKLIIDAPGYGYTSSVPQSGY
LSFSPPELSFGRFQPDEQGWLDTIKSVSDGGTVRISTMDWLXSIQYMDRTVYWSSLSTAI
REVVFSKHAKVNILVAYWAHFINNTDLYLKSLLYSNVLCTSSKNNECSGKVEIKYYKVPG
YNMTGPAIVNGKKTGNLYPAFTRVNHGKYAVSDIRGHISTSNLIWDYFYTTAGVSFGTYN
PAIVAQLQEIFDADWNSPYAVPVEGLSDGHACSS
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggtgctcaggtacagtatcatcgtatcattcttgttgtttttggtggtcaacttgact
cacccacgtttcactgagtcactgccacgatgcaaagcttggttggtccaatccatccca
actgacatgccccatctccctccagttcctggtgttctttccactggtgatgtttttaag
tggctggcttacaattcaaccgataagcttgatataatagctcaatattggcaattgaaa
gctcatccagaggattctcgttcgggggattatggatactcaaaggctgatatgcatcgt
tttggtgcccatcaaggtttttctgtttatactgccctggaaaatgctgctgatcgtgat
gttgatatcaggctagtacagcactctggagtatatcctgactataccaaagaaccatcc
agcctagctgcaagaagaccaaatgtcaagagtgtgactttattacttgataaatggtgg
ggttcaggcattgttcatgccaaagtttggatatcagataatagagatgtatatatagga
tctgcaaacaatgactggaaatctcttactcaggtgaaggaagttggaatttatcttgtt
ggttgtcctaaagtagcaaggaaagttggggtctattttcacaacctatggagacttgca
catcttgatgattcagcttacacaacaacaatcttagaccaacaatggcagattcaaaga
aaagttccatgttggtcacatttcattgaatctgacatgagatgcacgccacaacttcct
cgtttcgaggagattccttacgttgccggctatcctacattatcggaccctaaaatattg
aagttgattattgatgctcctggatatggttataccagttcagttcctcaatcaggctat
ctatctttctctccgccagagctatcatttggcaggttccaacctgatgaacaaggatgg
ctggatacgattaaatccgtctctgacggagggaccgttaggattagtacaatggactgg
ctgnngtcaatccaatacatggaccgaacggtttattggtcatctctttcaactgctatc
agagaggttgtgttctccaagcatgcaaaagtgaatatacttgtagcatactgggcacat
tttataaacaacactgatctctacttgaaatcacttctctactccaatgtcctttgcact
tcttcaaagaacaacgaatgttccggcaaagttgagatcaagtattacaaggtgccaggt
tacaacatgaccggaccggctatcgtgaatggaaagaaaactggaaatctctatccggct
ttcaccagagtcaaccatggtaaatatgcggtgagtgacatacgtggtcacattagcacc
agcaatcttatatgggattatttctacacaacagccggtgttagcttcgggacgtataat
ccggccattgttgctcagcttcaagaaatcttcgatgcagattggaattctccatatgct
gttccagttgaggggttgagtgatggtcatgcttgttctagttga
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