Gossypium hirsutum (upland cotton): 121232023
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Entry
121232023 CDS
T04793
Name
(RefSeq) auxin response factor 2B-like isoform X1
KO
K14486
auxin response factor
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
121232023
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GFIT
Motif
Pfam:
Auxin_resp
B3
AUX_IAA
Sulfatase
Motif
Other DBs
NCBI-GeneID:
121232023
NCBI-ProteinID:
XP_040973285
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Position
A07:6106678..6111450
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AA seq
874 aa
AA seq
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MTNTEVAMKGNCVNGRGGESFSSGYSEPNDGRNTVEGQNGHSTRQAPATDPESALYNELW
HACAGPLVTVPREQDRVFYFPQGHIEQVEASTSQVADEQMPVYNLPSKILCRVINVQLKA
EPDTDEVFAQVTLLPEPNQDENTVNKEPPAPQPPRFHVHSFCKTLTASDTSTHGGFSVLR
RHADECLPPLDMSRQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVYVSSKRLV
AGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAYMTKTIFTVY
YKPRNSSQLYSCLSNFCCRTSPAEFIVPFDQYMESMKNNYSIGMRFKMRFEGEEAPEQRF
TGTIVGIEDADPKKWQDSKWRCLKVRWDETSTIPRPERVSPWKIEPALAPPALNPLPMPR
PKRARSNAVPSSPDSSVLTREGSSKAIVDPSPATGFSRVLQGQEFSTLRGNFAESHESDT
AEKSVIWRPTVDDEKIDVVHTSRRFGSENWMSSGRHEPAAYTDLLSGFRSNADSSLGYCP
PMVDQTSLASNPKRRQLLDQEGKLGSWSLMSSGLSLKLVDSNAKPSVQGSEVPYQARGNG
RFSGFGEYPVLQGHRIEHPHGNWLMPPPTSSNYENPIQSRDLMPKASLGQDHENGKSREG
SCKLFGIPLISNSVASEPTVSPINATNKAASHVEAAPNQARTFTFDQKSEQPKFSRLAEN
LSIFNEQEKSFQLGQPHTREVQSKSPSASTRSCTKVLIQGSALGRSVDLTKFNNYDELIA
ELDQLFEFGGELMAPKKNWLVVYTDDEGDMMLVGDDPWQEFCSMVRKIGIYTREEVQKIK
PGSLNSKGEDNPVSVEGPDAKDVKCTPASSTENC
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atgacgaatacggaggtagctatgaaagggaattgtgtgaacggaagaggaggagagagc
ttttcttctggttatagtgagccaaatgatggtaggaataccgtggaagggcaaaatggt
cattcgactcgtcaagctccggctacagaccccgaatcggcgttgtataatgaactatgg
catgcatgtgctggacctttggtcactgttcctcgtgaacaagatcgtgtgttttacttt
cctcaaggtcacatagaacaggttgaggcgtctactagtcaagtagcagacgaacagatg
ccagtgtataatcttccatcaaagatcctttgtcgtgtgattaacgttcagttaaaggct
gaaccagatacagatgaagtctttgctcaagtgactttacttcctgagcctaatcaagat
gagaacactgtgaacaaggagcctcctgcgcctcaaccaccacggttccatgtgcattcc
ttttgcaagaccctcactgcctcagatacaagcacccatggtgggttttcggtgctcagg
cggcatgcagatgaatgtcttccaccattggacatgtcacggcaacctccaacccaggag
ttggttgctaaggatttgcatggaaatgagtggcgattccggcatattttcaggggtcaa
ccacgaaggcacttgcttcaaagtggatggagtgtttatgttagctccaagaggcttgtt
gcaggggatgcttttatatttttaagaggcgagaatggagaattacgtgttggtgtacga
cgtgcaatgaggcagcagggcaatgttccttcatcagtaatatcaagtcacagcatgcat
cttggtgtgcttgcaacagcatggcatgcctacatgacaaaaacaatattcactgtgtac
tacaaacctaggaactcatcgcagttgtattcatgcctctcaaatttctgttgtaggaca
agtcctgctgagtttattgttccttttgatcagtacatggagtcaatgaagaataattac
tccatagggatgaggttcaaaatgagatttgaaggtgaagaggctcccgaacagaggttt
actggaacaatagttggaattgaagatgctgatcctaaaaagtggcaggattccaaatgg
agatgcctcaaggtgcgatgggatgagacttctaccatacctcgtccagagagagtttct
ccctggaaaattgaacctgctttggctcctcctgcgctgaatccccttccaatgcccagg
ccaaaaagggcccgatctaatgcagtcccttcatctcctgattcctctgtacttactagg
gaaggttcatcaaaagctattgtagacccttcaccagctactgggttttcaagggtcttg
caaggtcaagaattctcgaccttgcgaggcaactttgctgagagtcatgagtctgacact
gctgaaaagtcggtgatatggcgacctacggtagatgacgagaagattgatgtggttcac
acttcaagaagatttgggtcagagaattggatgtcttctgggaggcacgaaccagcagca
tacacagatctgctctcaggttttaggtcaaatgctgattcctcccttgggtattgtcca
ccgatggttgatcaaacttcattagctagtaatccaaagagaagacaattactagatcaa
gaagggaagcttggctcttggtccctcatgtcctctggtctctcactcaagttggttgac
agtaatgctaagccttctgtgcaaggttctgaggttccttatcaagctcgaggaaatggt
agatttagtggttttggtgagtatcctgtgcttcaaggtcataggatcgagcacccacat
ggaaactggttgatgcctcccccaacgtcatctaattacgagaatcctatccaatcaaga
gatttaatgcccaaagcttcattgggacaagatcatgagaacggaaaatctagagaagga
agttgcaagctctttggtattcctctcattagcaattctgttgcatcagagcctactgtc
tctcctattaatgccacgaacaaggcagcaagtcatgtggaagctgcaccaaaccaagct
cgtacatttacgtttgatcaaaagtctgagcagccaaaattctcacggttggcagagaat
ctgtctatttttaatgagcaggagaaatcatttcagctgggtcagcctcatacaagagag
gttcaaagcaaatctcctagtgcttcaactaggagttgtacaaaggtcctaattcaaggg
agtgctcttggtaggtccgtggaccttactaagttcaacaactacgatgaactgattgct
gaattggatcagttatttgaatttggtggtgaattaatggcccctaaaaagaattggctt
gtcgtttataccgatgatgagggtgatatgatgcttgttggagatgatccctggcaggaa
ttttgctccatggttcgcaagatcggtatctacactagggaagaggttcagaagataaag
cccgggtcattgaattcaaagggcgaggacaatccggtttctgtggaaggcccagatgca
aaagacgtgaaatgtacaccagcatctagtacagagaattgttaa
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