Gossypium hirsutum (upland cotton): 121232024
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Entry
121232024 CDS
T04793
Name
(RefSeq) chaperone protein ClpC1, chloroplastic
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
ghi03110
]
121232024
Chaperones and folding catalysts [BR:
ghi03110
]
Heat shock proteins
HSP100
121232024
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
Clp_N
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
AAA_16
Sigma54_activat
UVR
AAA_22
nSTAND3
TniB
NBD_SMAX1
AAA_14
AAA_28
NACHT
Zeta_toxin
AAA_18
AAA_25
IstB_IS21
Torsin
DNA_pol3_delta2
YopE_N
Motif
Other DBs
NCBI-GeneID:
121232024
NCBI-ProteinID:
XP_040973289
UniProt:
A0ABM3C1W5
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Position
A07:6129358..6134118
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AA seq
920 aa
AA seq
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MAKVLAQSTIVPSLVTSRSHGRSTGKSKRSVKMMSSLRTPGLRINSFSGLRGSTSLDNMV
RVDQDFHSKVAISISSRRGRGSRCVPKAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQ
ILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSL
EEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGEGNEVSVVT
GGSTGNTKMPTLEEYGTNLTKLAEEGKLDPVVGRQDQIERVVQILGRRTKNNPCLIGEPG
VGKTAIAEGLAQRIATGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQS
DEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKDPALE
RRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALISAAQLSYQYISDRFLPDKA
IDLIDEAGSRVRLRHAQLPEEARELEKELRQITKSKNEAVRSQDFEKAGELRDREIELRA
QITAIQEKDKEMNKAEAEAGDGGPVVTEVDIQHIVSSWTGIPVEKVSTDESDRLLKMEET
LHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGS
EEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPD
VFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSY
NRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKSKEIELQ
VTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNV
TVLNGSSGTSESLTDPIPVV
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atggctaaagttctggcgcagtcgactattgttccttctctagttacgagtcgaagtcat
ggtcgatccactgggaaatcgaaaaggtctgtcaaaatgatgtctagtttacgaacacct
ggattgaggataaatagtttctctgggttgcggggctcaacttctttggataatatggtt
agagttgaccaagatttccattccaaggttgcgatttcaatctcgtctcgacgtggaagg
ggaagtaggtgtgtgcctaaagccatgtttgaacgctttactgaaaaagcaattaaagta
atcatgcttgctcaagaggaagctaggcgacttggccataactttgtcggtacagagcaa
attttgttgggtcttattggtgaaggtactggcattgctgcaaaagttcttaaatccatg
ggaatcaatcttaaagatgcgcgagttgaagtggagaagataattggaaggggaagtggt
tttgttgctgtggaaattccatttacacctcgtgctaaacgtgttttggaactctcgtta
gaagaagctcgccaacttggccataattacattggatcagagcatctgcttctggggttg
cttcgtgaaggtgaaggtgtagcagcacgtgttcttgagaatttgggtgctgacccgagc
aatatccgcacacaggttattcgtatggttggtgagggcaacgaagttagtgtggttacc
ggtggatcaactggtaacacaaagatgccaacacttgaggaatatggaaccaatttgact
aagttagctgaagagggtaaattggatcctgttgttggaaggcaagatcaaatcgaacga
gttgtccaaatattgggtagacgaaccaaaaacaacccgtgtcttattggagaacctggt
gttggaaaaactgctatagcagaaggccttgcccagcgaattgctactggtgatgttcct
gatactattgagggcaagaaggttataactcttgatatgggtcttcttgttgccggaaca
aaatatcgtggtgagtttgaggagaggttgaagaagctaatggaggaaatcaagcaaagt
gatgagataatattgtttattgatgaggtgcacactttgattggagctggagcagctgaa
ggtgcgattgatgctgccaatatcttgaagcctgctcttgcaagaggtgaattgcagtgt
attggagctaccacacttgatgaataccgaaagcatattgagaaagacccagctttggaa
aggcgtttccagccagttaaagtgcccgaaccatctgttgatgaaactatacagattttg
aaaggtttacgagagcgttacgagattcaccacaagcttcgttacacagatgaggcctta
atctctgccgcacagctttcataccagtacatcagtgatcgttttctgcctgataaagca
attgacttgattgatgaagctggatctcgtgttcgccttcgtcatgcacagctccctgag
gaagctagagagcttgagaaagagctccggcagatcacaaagtcgaagaacgaagcagtt
cgcagccaggactttgagaaggctggggaattacgtgatcgggaaattgaactcagggct
cagatcactgcaatccaagagaaagacaaggagatgaataaggcagaggcggaggcaggg
gatggagggcctgtagtgactgaagtcgacattcagcatatagtctcttcatggactggt
attcctgtcgagaaagtatcaactgatgaatctgatcgcctacttaaaatggaagagacc
cttcataagcgagtcattggtcaggatgaagctgtcaaagccattagccgtgctattcga
cgtgctcgtgttggtctcaagaaccccaaccggccaattgccagctttatcttctctgga
ccaactggtgtaggaaaatcggaactagcaaaggcactagctgcttactactttggctct
gaagaagccatgatccgacttgatatgagtgagttcatggaaaggcacacagtgtccaag
ctgatcggttcaccccctgggtatgttgggtacactgagggtggtcagctaactgaggct
gttaggaggcgaccatacaccgtagtacttttcgatgagattgagaaagcccatcctgat
gttttcaacatgatgcttcagatcctcgaggacggaaggctcacagatagtaaaggaaga
actgtcgatttcaagaatacactcctgataatgacatcaaacgtcggaagcagtgtgatc
gaaaagggtggacggcgaattggatttgatctcgattatgatgagaaagacagtagttac
aatagaataaagagcctggtgacagaagaactgaagcaatatttcaggccggaatttttg
aacagattggacgagatgattgttttcaggcaactcaccaagttagaagtgaaggaaatt
gccgatataatgctcaaagaagtgtttgacaggcttaaaagcaaagaaattgagctccaa
gtgaccgaaaggtttagagaaagggtggtggaagaagggtacaacccaagttacggagca
aggcctttaagaagagccataatgagacttctggaagacagcatggctgagaagatgctt
gcaagggaaatcaaggaaggtgattcagtaattgtagatgttgactctgatggaaatgtc
acggttctcaatggtagcagtggcacttccgagtcattgaccgatccgattccagttgtg
taa
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