Gossypium hirsutum (upland cotton): 121232141
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Entry
121232141 CDS
T04793
Name
(RefSeq) protein-tyrosine-phosphatase IBR5-like isoform X1
KO
K04459
dual specificity MAP kinase phosphatase [EC:
3.1.3.16
3.1.3.48
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
121232141
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ghi01009
]
121232141
Enzymes [BR:
ghi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
121232141
3.1.3.48 protein-tyrosine-phosphatase
121232141
Protein phosphatases and associated proteins [BR:
ghi01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Dual specificity phosphatases)
MAPK phosphatases
121232141
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DSPc
Init_tRNA_PT
Tc-R-P
YjeF_N
PTP-SAK
Glyco_hydro_92
DUF7803
Cullin_binding
Motif
Other DBs
NCBI-GeneID:
121232141
NCBI-ProteinID:
XP_040973545
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All DBs
Position
A07:14333559..14339451
Genome browser
AA seq
265 aa
AA seq
DB search
MRKRERENPCGICGHYHKFEEGEVCGVCGHRAPVSSDETSLQVSAFPSVILPDFLYLGSY
DNASRSELLKTQGITRVLNTVPACQNLYKNSFTYHCLQDDKILQFDDAVQFLEQCERDKA
RVLVHCMSGKNKSPAIVIAYLMKSKGWRLQPSYQWVKERRSSVELSQDAYQQLQEYEQKL
FGSCDNSNLAGAPSFNFGFSNPSDPLPLPVPIPAFNNLGATSIFARPPPFEVPPHGFTFG
SDRTQRSMSENLSNPSGSDIPMDSS
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgaggaagagggaaagagagaatccttgtgggatatgtggtcactatcacaaattcgaa
gagggggaggtttgtggggtatgtgggcatagagctcccgtttcatctgacgaaacgtcg
cttcaagtcagtgctttcccctccgtgatattgcctgattttctttatttgggtagctac
gataatgcctctcgttctgagcttcttaagactcagggtattactcgtgtcctcaatact
gtacctgcttgtcaaaatctctacaagaattcatttacctatcactgcctacaagatgac
aaaattttgcaatttgatgatgcggtacaatttttagagcaatgtgagagagataaggct
cgagtcctcgtgcactgcatgtcaggaaaaaataagtcaccggctattgtaatagcttac
ttgatgaagtctaaaggatggaggcttcaaccaagctatcagtgggttaaagaacggaga
tcatctgttgagttaagtcaagatgcgtaccagcaattgcaggaatatgagcaaaagctt
tttggatcgtgtgataatagcaatcttgcaggagccccatccttcaactttggcttctcg
aacccaagtgatccacttccacttcctgttcccattcccgctttcaacaaccttggtgct
acttccattttcgcccgtccaccgccttttgaagttcctccgcacgggtttacgttcggt
tctgaccgaacccagagaagcatgtctgaaaacctatcaaatcctagtggaagtgatatt
ccaatggatagttcttaa
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