KEGG   Gossypium hirsutum (upland cotton): 121232141
Entry
121232141         CDS       T04793                                 
Name
(RefSeq) protein-tyrosine-phosphatase IBR5-like isoform X1
  KO
K04459  dual specificity MAP kinase phosphatase [EC:3.1.3.16 3.1.3.48]
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    121232141
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ghi01009]
    121232141
Enzymes [BR:ghi01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.16  protein-serine/threonine phosphatase
     121232141
    3.1.3.48  protein-tyrosine-phosphatase
     121232141
Protein phosphatases and associated proteins [BR:ghi01009]
 Protein tyrosine phosphatases (PTPs)
  Class I PTPs (Dual specificity phosphatases)
   MAPK phosphatases
    121232141
SSDB
Motif
Pfam: DSPc Init_tRNA_PT Tc-R-P YjeF_N PTP-SAK Glyco_hydro_92 DUF7803 Cullin_binding
Other DBs
NCBI-GeneID: 121232141
NCBI-ProteinID: XP_040973545
LinkDB
Position
A07:14333559..14339451
AA seq 265 aa
MRKRERENPCGICGHYHKFEEGEVCGVCGHRAPVSSDETSLQVSAFPSVILPDFLYLGSY
DNASRSELLKTQGITRVLNTVPACQNLYKNSFTYHCLQDDKILQFDDAVQFLEQCERDKA
RVLVHCMSGKNKSPAIVIAYLMKSKGWRLQPSYQWVKERRSSVELSQDAYQQLQEYEQKL
FGSCDNSNLAGAPSFNFGFSNPSDPLPLPVPIPAFNNLGATSIFARPPPFEVPPHGFTFG
SDRTQRSMSENLSNPSGSDIPMDSS
NT seq 798 nt   +upstreamnt  +downstreamnt
atgaggaagagggaaagagagaatccttgtgggatatgtggtcactatcacaaattcgaa
gagggggaggtttgtggggtatgtgggcatagagctcccgtttcatctgacgaaacgtcg
cttcaagtcagtgctttcccctccgtgatattgcctgattttctttatttgggtagctac
gataatgcctctcgttctgagcttcttaagactcagggtattactcgtgtcctcaatact
gtacctgcttgtcaaaatctctacaagaattcatttacctatcactgcctacaagatgac
aaaattttgcaatttgatgatgcggtacaatttttagagcaatgtgagagagataaggct
cgagtcctcgtgcactgcatgtcaggaaaaaataagtcaccggctattgtaatagcttac
ttgatgaagtctaaaggatggaggcttcaaccaagctatcagtgggttaaagaacggaga
tcatctgttgagttaagtcaagatgcgtaccagcaattgcaggaatatgagcaaaagctt
tttggatcgtgtgataatagcaatcttgcaggagccccatccttcaactttggcttctcg
aacccaagtgatccacttccacttcctgttcccattcccgctttcaacaaccttggtgct
acttccattttcgcccgtccaccgccttttgaagttcctccgcacgggtttacgttcggt
tctgaccgaacccagagaagcatgtctgaaaacctatcaaatcctagtggaagtgatatt
ccaatggatagttcttaa

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