Guyparkeria halophila: GM160_00845
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Entry
GM160_00845 CDS
T06369
Name
(GenBank) hypothetical protein
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
ghl
Guyparkeria halophila
Brite
KEGG Orthology (KO) [BR:
ghl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ghl03016
]
GM160_00845
Enzymes [BR:
ghl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
GM160_00845
Transfer RNA biogenesis [BR:
ghl03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
GM160_00845
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
QGT77542
UniProt:
A0A6I6D832
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All DBs
Position
complement(177268..178410)
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AA seq
380 aa
AA seq
DB search
MNHEQPQVRFVTRDEELVRLIEAMRASDYLPLDTEFVRERTYFPQLALLQVATTDAVWLV
DPVAGLDLAPFWQELVGRETPVILHAGDQDLDLILTAAGRLPPRVFDTQIAAELLGIGGQ
MSYAALAEALLGIRLDKGETRSNWLARPLSQTQIDYAVQDVAQLHALYPLLERRLEEAGR
LDWMAEETARQLDPARFSPPDERRWQKVRGVQTLNRAGLAALRILAAWRERLAREQDRPR
RWVWGDQAMLDLAHAIARRLADSPPDAEGIDGQIARARSPLGGDAAARRALAEEIATALA
GDPSGWPSLPRPPALPPAQRELVKSRQSQLAALADEQAISPSRLATSAELKQHLANPDRP
SRLTQGWRAPLLAPILQATD
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgaaccacgaacaaccccaggtccgtttcgtcacccgcgacgaggaactcgttcgcctg
atcgaggccatgcgcgcgtccgactacctgccgctcgacaccgagttcgtccgcgaacgt
acctacttcccgcagctcgccctgttgcaagtcgccaccacggatgccgtctggctggtc
gatccggtcgccggcctcgacctcgcgcccttctggcaggagctggtcggccgcgagaca
ccggtgatcctgcacgcgggcgaccaggacctcgacctgatcctgaccgccgccggccgg
ctgcccccgcgcgtctttgatacccagattgccgccgagctgctcggcatcggcggccag
atgagttacgccgccctcgccgaggccctgctcggcattcgcctggacaagggcgaaaca
cgcagcaactggctcgcccgcccgctgagccagacccagatcgactacgccgtgcaggac
gtcgcccagctccacgccctctacccgctcctcgagcgccgcctcgaggaggccggtcgc
ctcgactggatggccgaggaaaccgcacggcaactcgatcccgcacgcttttccccgccc
gacgagcggcgctggcagaaggtgcggggcgtccagacgctcaaccgtgccggtctcgcg
gcgctgcgcatactggccgcctggcgagagcgactggcgcgcgagcaggatcgcccgcgc
cgctgggtctggggagaccaggccatgctggatcttgcccacgccatcgctcgacgcctt
gccgacagcccgcccgatgccgagggcatcgacgggcagatcgcgcgagcgcgctcgccg
ctgggcggagatgcggccgctcgccgggcgcttgccgaggagatcgccaccgccctggcg
ggcgacccgagtggctggccgagcctgccgcgtccgccggccctgccgccagcccagcgc
gaactggtaaaatcccgccagagccagctggccgccctcgccgacgagcaggccatcagc
ccctcgcggctggcgaccagcgccgaactgaaacagcacctggccaatccggatcggcca
tcacggctcacccaaggctggcgggccccgttgctcgcccccatcctgcaggcaaccgac
tga
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