Guyparkeria halophila: GM160_01960
Help
Entry
GM160_01960 CDS
T06369
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ghl
Guyparkeria halophila
Pathway
ghl03420
Nucleotide excision repair
ghl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ghl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GM160_01960 (uvrD)
03430 Mismatch repair
GM160_01960 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ghl03400
]
GM160_01960 (uvrD)
Enzymes [BR:
ghl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GM160_01960 (uvrD)
DNA repair and recombination proteins [BR:
ghl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GM160_01960 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
GM160_01960 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
UvrD-helicase
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_12
Viral_helicase1
nSTAND_NTPase5
Motif
Other DBs
NCBI-ProteinID:
QGT77753
UniProt:
A0A6I6D1L6
LinkDB
All DBs
Position
429802..432006
Genome browser
AA seq
734 aa
AA seq
DB search
MSQDPILDPLNAAQREAVTSPSLATLVLAGAGSGKTRVLTHRMAWLVAEQGISPYSLLAV
TFTNKAAGEMRGRLGSLLDGQELGPRGVDGMWVGTFHGLSHRLLRQHAREAGLPEGFQII
DSDDQLRLVKRLIREAELDENRFPPRLVASMINGFKEDGLRARHVVPGDDPIRDQVIVIY
KAYERVCERSGLVDFTELLLRATELLRGNDALRAHYQRRFRQVLIDEFQDTNALQYAWAR
LLVGEDNGIFAVGDDDQSIYGWRGAKVEHIQHFSRDFPNTHLIRLEQNYRSTRTILEAAN
SVIARNQGRLGKNLWTEGDHGAPIRFYRAFNDQDEANFVVEQIATAVREGHQRSDCAVLY
RSNAQSRLLEEALIREGMPYRIYGGLRFFERAEIRDALAYLKLVANRHDDTSFDRIVNRP
TRGIGDKTLNEIRQAAREQGASLWDAALILLAENRLSPRAAGALRQFMTLIEAIDQQTIN
DELGERIEKTIDKSGLRALFEKDRDRERGEAKIENLDELVSAGRGFVMERNTDEEMSEIE
AFLAHASLEAGEAQGAAWEDCVQMMTLHAAKGLEFPQVFLVGVEEGLFPHQMSIDEPGRL
EEERRLCYVGITRAEQQLTITCAESRRLHGKQIFPMPSRFLGELPPDLVEEVRPRATRAA
AAFGARRPEGEPGPRTHKQNETGFEIGQTVRHAKFGEGTILDCEGTGASARVQVNFGQHG
AKWLILSYANLQPA
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaagatccgattctcgacccactcaacgccgcccagcgcgaggcggtcactagc
ccctcgttggccaccctggtgctcgctggcgccggctcgggcaagacccgagtgctcacc
caccgcatggcctggctggtcgccgagcagggcatctcgccctattcgctgctggccgtg
acgttcaccaacaaggccgccggcgagatgcgcggccggctgggttccttgctcgacggg
caggagctcggtccgcgcggcgtcgacggcatgtgggtgggcaccttccacgggctctcg
caccgcctgctgcgacaacatgcccgcgaggcggggttgcccgagggtttccagatcatc
gattccgatgaccagctgcgcctggtcaagcgcctgattcgcgaggcggagctcgacgag
aaccgtttcccgccgcggctggtcgcctcgatgatcaacggcttcaaggaggacgggctg
cgcgcccgccacgtggtgccgggcgacgacccgatccgcgaccaggtgatcgtgatctac
aaggcttacgagcgtgtctgcgagcgcagcgggctggtcgacttcaccgaactcttgctg
cgcgccaccgagttgcttcgcggcaacgatgccctgcgcgcccattaccagcgccgtttc
aggcaggtgttgatcgacgagttccaggacaccaacgccctgcagtacgcctgggcacga
ttgctggtgggcgaggacaacggcatcttcgccgtgggcgacgacgaccagtccatctac
ggctggcgcggcgcgaaggtcgagcacatccagcacttctcgcgcgacttccccaacacg
cacctgattcgcctcgagcagaactaccgctcgacgcgcaccatcctcgaggcggccaac
agcgtcatcgcgaggaaccagggccggctgggcaagaacctctggaccgagggcgaccac
ggcgcgccgattcgtttctaccgtgccttcaacgaccaggacgaggccaacttcgtggtc
gagcagatcgccaccgccgtgcgcgagggccaccagcgttccgattgcgcggtgctctat
cggtcgaatgcccaatcgcgcctgctcgaggaggcgttgatccgcgaggggatgccgtat
cgcatctacggcgggctgcgctttttcgagcgcgccgagattcgcgacgcactcgcctac
ctgaagctcgtggccaatcgccacgacgacacctccttcgatcggatcgtcaaccggccg
acccgcggcatcggcgacaagacgctcaatgaaatccgccaggcggcgcgcgagcagggc
gcctcgctgtgggacgccgcgctgatcctgctggcggaaaaccgcctgtctccgcgtgcc
gccggggcgctccgccagttcatgaccctgatcgaggcgatcgaccagcagaccatcaac
gacgagctgggcgagcgcatcgagaaaaccatcgacaagagcggcctgcgcgcgctgttc
gagaaggaccgcgaccgcgagcgcggcgaggccaagatcgagaacctcgacgagctggtt
tctgccgggcgcggcttcgtcatggagcgcaacaccgacgaggagatgagcgagatcgag
gccttcctcgcgcacgcgagtctcgaggcgggcgaggcgcagggcgcggcctgggaggac
tgcgtgcagatgatgaccctgcacgcggccaagggcctggaattcccgcaggtgttcctg
gtcggcgtcgaggagggcctgttcccgcaccagatgtcgatcgacgagcccgggcgcctc
gaggaggagcgccggctctgctacgtgggcatcacccgcgccgaacagcagctgaccatc
acctgcgccgagtcgcgccggctgcacggcaagcagatcttccccatgccgtcgcgcttt
ctcggcgagctgccgccggatcttgtcgaggaggtccgcccgcgggcgacccgtgcagcg
gcggccttcggcgcccggcgaccggagggcgagccgggcccgcgcacccacaagcagaac
gagaccggtttcgagatcggccagaccgtgcgtcatgcgaagttcggcgagggcaccatc
ctcgattgcgagggcaccggcgcctcggcgcgggtgcaggtcaacttcggccagcacggc
gcgaagtggctgatcctgtcgtacgcgaatctccagccggcctga
DBGET
integrated database retrieval system
