Guyparkeria halophila: GM160_04455
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Entry
GM160_04455 CDS
T06369
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
ghl
Guyparkeria halophila
Brite
KEGG Orthology (KO) [BR:
ghl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ghl03016
]
GM160_04455 (thpR)
Enzymes [BR:
ghl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
GM160_04455 (thpR)
Transfer RNA biogenesis [BR:
ghl03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
GM160_04455 (thpR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
QGT78211
UniProt:
A0A6I6D4C4
LinkDB
All DBs
Position
970401..970913
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AA seq
170 aa
AA seq
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MTAQRRVFLALWPDDATRAALHHIARGLDVGGRPVPRAHLHLTLAFPGTIPARQADCLAE
RLSSLPAESTPILLDRLGYFAGPRVAWLGPSRVPPALARLAAEARGLCLACGVETDDRPF
VPHVTLRRVARAPGGATIDPPIHWFADTVALVESGRDGHPGRYGLLARSR
NT seq
513 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgcgcaaaggcgggtgtttctcgccctgtggccggacgacgccacccgggcggca
ctgcatcacatcgcccgcggcctcgacgtcggcggtcggccggtgccgcgggcccatctg
cacctgacgctggcattccccggcaccatcccggcccggcaggccgactgtctggccgag
cgactgtccagcctgcccgccgagtccaccccgatcctgctcgatcgtctggggtatttc
gccgggccacgcgtggcctggctggggccgtcgcgcgttccgccggcattggcccgccta
gccgctgaggcgcgcggcctgtgtctcgcctgcggggtggagacggacgatcgcccgttc
gtcccgcacgtcaccctgcggcgcgtcgcccgcgcacccggcggcgcgaccatcgatccg
cccatccactggttcgccgacaccgtcgcgctggtcgaatcgggccgtgacgggcatccc
ggccgctacggcctgctggcccgttcgcgctag
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