Guyparkeria halophila: GM160_04920
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Entry
GM160_04920 CDS
T06369
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
ghl
Guyparkeria halophila
Pathway
ghl03410
Base excision repair
ghl03430
Mismatch repair
ghl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ghl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GM160_04920 (recJ)
03430 Mismatch repair
GM160_04920 (recJ)
03440 Homologous recombination
GM160_04920 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ghl03400
]
GM160_04920 (recJ)
DNA repair and recombination proteins [BR:
ghl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
GM160_04920 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
GM160_04920 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
GM160_04920 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
QGT78294
UniProt:
A0A6I6D3X7
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All DBs
Position
1063879..1065690
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AA seq
603 aa
AA seq
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MTAEAKANPEANPRAARLLGVASIRRRQAPDVSDSLAHLNPRLARVLAARGITQAEQLDH
RLQAVLPPTGLPDLDEAARLVSDAIERDDSILIVGDFDADGATATALCLRGLRAMGGERV
DFLIPDRQRHGYGLSPALLDELDTPPALILTVDNGISAHDGVAAAKAAGSRVVVTDHHLP
GDTLPAADAIVNPNRADADFGSTALAGVGVAFYLLAAVRSELDRRGWFATRQRPNLANWL
DLVALGTIADVVELDDNNRRLVAQGLSRIRSHACAPGILALFTVAGRDPREARSSDLGFA
IGPRLNAAGRLENMRLGVECLLADEAAEARRLASTLDQINRQRRDVEANMLDTVAADLDR
AMAGQGDTPPSNPADWVRFDPGFHPGVIGIVAGRLKTRWVRPVFVFAPAEVGSNDGRLKG
SGRSILGIHLRDLLVEIDARQPGLIDGFGGHAMAAGLSLERSRLDAFRQAFTQALERHHE
RLPDGREVITDGPLEAADLHLDFIDALDHHGPWGTGFPEPLFDNTFEVLEKTALKDGKHW
RLSVRLLDHPNARPVDAIWFRAPDPLPPGRHWQIAYRPVADSFRGRKRLKLFVETALPVT
VSD
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccgaggcaaaggccaaccccgaggccaaccccagggccgcccgcctgctgggt
gtcgcgagcatccgccggcgtcaggcccccgatgtcagcgactccctggcgcatctcaat
ccccggttggcgcgcgtgctggccgcgcgtggaatcacgcaggcagagcaactcgatcat
cgcctgcaggcggtcctcccgccgacggggctgccggacctcgatgaagcggcccgactg
gtcagcgatgccatcgagcgggatgactccatcctgatcgtcggcgatttcgatgccgac
ggcgcgaccgccacggccctgtgtttgcgcggtctgcgcgccatggggggcgagcgggtc
gacttcctgatccccgatcgccagcgccacggctacggcctgagcccggcgttgctcgac
gaactcgacacaccgccggcgttgatcctcacggtcgacaacggcatcagcgcccacgac
ggggtcgccgccgccaaggccgccgggtcgcgcgtggtggtcaccgaccatcacctgccg
ggcgacacgcttcccgctgccgatgccatcgtcaatcccaaccgtgccgatgccgacttc
gggtcgaccgcgctggcgggcgttggcgtggccttctacctgctcgccgccgtgcgtagt
gaactcgatcgacgcggctggttcgccacgcgtcagcggcccaacctcgccaactggctg
gatctggtggccctgggcaccatcgccgacgtggtcgagcttgacgacaacaaccgccgt
ctggtcgcccaggggctttcccgcatccgctcccacgcctgcgcgccggggatactcgcg
ctgtttaccgtggccgggcgcgatccgcgcgaggcgcgatccagcgatctggggtttgcc
atcggcccgcgactcaacgccgccgggcggctcgagaacatgcggctgggggtcgaatgc
ctgctcgccgacgaggcggccgaggcccgccggctggccagcacgctcgatcagatcaat
cgtcaacgtcgcgacgtcgaggccaacatgctcgacaccgtcgccgcggacctggatcgc
gccatggccgggcagggcgatacgccgccttcaaacccggccgactgggtacgcttcgat
ccgggctttcaccccggcgtgatcggcatcgtcgccgggcgcctgaagacccgctgggtg
cgccccgtgttcgtcttcgctccggccgaggttggcagcaatgacggccggctcaagggc
tcgggtcgctcgattctcggcatccacctgcgcgacctgctggtcgagatcgacgcccga
cagcccgggctgatcgacggcttcggcgggcacgccatggcggccgggctgtcactcgag
cgctcccgactcgacgccttccgccaggccttcacgcaggccctcgaacgccaccacgag
cggctccccgacggtcgcgaagtgattaccgacggcccgctggaggccgccgatctccac
ctcgatttcatcgacgccctcgaccaccacggcccttggggcaccggctttcccgaaccc
ctgttcgacaacaccttcgaggtgctcgagaaaaccgccctgaaagacggcaagcactgg
cgcctgtcggtgcgcctgctcgaccacccgaacgcccgccccgtcgacgccatctggttc
cgcgcccccgatccactcccccccggccgccactggcagatcgcctaccgccccgtcgcc
gacagcttccgtggccgcaaacgcttgaagctctttgtcgagacggcgttgcccgtcacc
gtatcggattag
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