Guyparkeria halophila: GM160_05165
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Entry
GM160_05165 CDS
T06369
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
ghl
Guyparkeria halophila
Pathway
ghl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ghl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
GM160_05165 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ghl03400
]
GM160_05165 (xseA)
Enzymes [BR:
ghl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
GM160_05165 (xseA)
DNA repair and recombination proteins [BR:
ghl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
GM160_05165 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QGT78335
UniProt:
A0A6I6D298
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All DBs
Position
1122613..1124142
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AA seq
509 aa
AA seq
DB search
MPFNSGAPGAGATALSVTQINKQAGDLLGQVFGVVEVIGEISEHKRAASGHHYFALKDEH
SQLRCAFFRGNAQRCAHPLREGEEVVATGRLGIYTERGAYQLIVQSIAPAGEGRLAAEFE
RLKQRLLAEGLFAAEHKRPTPTMPRRIAVISSDTGAAIHDVRVTLARRLPLARVTLFPVR
VQGAESAGELRQAVSQLTSEAFDVALIVRGGGSLSDLWSFNDEALVRALYDCPVPVISGV
GHETDTTLCDLVADRRAATPTGAAELATPITASDMRQGIGRLADRARMRWEARQQTQAQY
LDGLSRRLERAGPVERLRLARSRLVGLAAPLRHGIERRIAQGRERTHGLRRRLDGAHPRR
QLEALRGRLVEPASRLHQGMVVIGQAERERVARLSRGLLISRERLMPRWRARLDSVRLDP
RSFERRLREERTRLAGLSRQLEALGPRQVQKRGYALVETRDGSSGVLVKRASEVSVLAGT
HDRLALNLRFADGDVPVEWRKPDSGASSS
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgccgttcaactccggcgccccgggcgcgggcgcgactgcgctttcggttacccagatc
aacaagcaggcaggcgatctgctcgggcaggtgttcggggtggtcgaggtaatcggtgag
atcagcgagcacaagcgcgcggcctccgggcatcactacttcgcgctcaaggacgagcac
tcccagctgcgctgcgcgttctttcgcggcaatgcgcagcgctgtgcccaccccctgcgc
gagggcgaggaggtggtcgccaccggccggctgggtatctacaccgagcgcggcgcctac
cagctgatcgtccagtcgattgccccggccggcgaggggcgactggcggccgagttcgag
cggctcaagcaacgcctgcttgccgagggcttgttcgctgccgagcacaagcgacccacg
ccgacgatgccgcggcggatcgcggtgatctcctcggacaccggggcggccatccacgac
gtgcgcgtgaccctggcgcggcgattgccgctggcgcgggtcacgctgttcccggtgcgg
gtgcagggggccgagtcggccggcgagctgcgtcaggcggtttcgcagctcacgagcgag
gcattcgacgtcgccctgatcgtgcgtgggggtgggtcgctgtcggatctgtggtcgttc
aacgacgaggcactggttcgtgccctctacgattgcccggtgccggtcatcagtggcgtg
ggtcacgagaccgacaccaccctatgcgacctggtggccgatcggcgtgcggccaccccg
accggggccgccgagctggccacgccgatcacggcgagcgacatgcgccaggggattggc
cggttggccgatcgtgcccgcatgcgctgggaggcgcgtcagcagacgcaggcccagtat
ctggacgggttgtcacgccggctggaacgcgccgggccggtggaacggttgcgcctggcc
cggtctcgtttggtcggcctggctgccccgctgcggcacgggatcgagcgacgtatcgcc
caggggcgcgaacgcactcacgggttgcgccggcgcctggacggggcgcatccgcgacgg
cagctggaggccttgcggggacgcttggtcgagcccgccagtcggttgcaccaggggatg
gttgtgatcggtcaggccgagcgcgagcgggtcgcgcggctctcgcgggggctgttgatc
agtcgggagcggctgatgccccgctggcgcgcacggcttgattcggtgcgtcttgacccg
cgcagcttcgaacgacgcctgcgcgaggagcgcacgcgattggcggggctgtcgcgccag
ctggaggcacttggcccccgccaggtgcagaaacgcggatacgccttggtcgagacgcgg
gacggctcgtcgggcgtgctggtcaagcgggcgtcggaggtgtcggtgctggcgggcacg
cacgaccggttggcgttgaacctgcgtttcgccgacggtgacgtgccggtggaatggcgc
aagcccgatagcggggcctcgtcttcctga
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