Guyparkeria halophila: GM160_05265
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Entry
GM160_05265 CDS
T06369
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ghl
Guyparkeria halophila
Pathway
ghl03030
DNA replication
ghl03410
Base excision repair
ghl03420
Nucleotide excision repair
ghl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ghl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GM160_05265 (polA)
03410 Base excision repair
GM160_05265 (polA)
03420 Nucleotide excision repair
GM160_05265 (polA)
03440 Homologous recombination
GM160_05265 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ghl03032
]
GM160_05265 (polA)
03400 DNA repair and recombination proteins [BR:
ghl03400
]
GM160_05265 (polA)
Enzymes [BR:
ghl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GM160_05265 (polA)
DNA replication proteins [BR:
ghl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
GM160_05265 (polA)
DNA repair and recombination proteins [BR:
ghl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
GM160_05265 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GM160_05265 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
DNA_pol_lambd_f
NYN_YacP
WD40_4
Motif
Other DBs
NCBI-ProteinID:
QGT78353
UniProt:
A0A6I6D344
LinkDB
All DBs
Position
1145004..1147718
Genome browser
AA seq
904 aa
AA seq
DB search
MSDRNGPVILVDGSSFLFRAFHALPPLNAPDGTPTGAIHGVVNMLLKMRREAAPSHMAVV
FDAPGKTFRDDIYPDYKAHRPPLPDDLRVQIEPVHALVRALGFPLLCVEGVEADDVIGTL
MHEARENGEEVIVATADKDFAQLVAPGVTLVNTMSNKTTDVAAVEEKYGIHPGQFIDFLA
LVGDKVDNIPGVPGCGPKTATKWINQYGSLDGIIRHAEEIKGKVGQSLRDSLEFLPISRE
LVTIRTDCDLPVRLNELVIEPADVQTGLALADRYGLNSLRRWFGEQGLVEGEGVTETVER
PEADYRTITDVAALDQWIERIEAAPRVAFDTETDSLEPMQNRVVGLSFAIDPHEAIYVPL
AHVGAHGERVEPQLDRDEVLARLKPWLEDERPTKILQNAKFDMHALANHGITLAGLVDDS
MLESYVLDPTASRHDMDTLASRELSHQTTTFEEIAGKGAKQLTFDQIEIDVATPYAAEDA
DITLQLADRLRARLAETPSLMAVYEEIERPLVPVLFSMERAGVAIDSEQLARQGEAIAER
IAAIESQAHEIAGEAFNLGSTKQLKSILFERMGLPVKVKTPKGEPSTNEEALSALVDEHP
LAQLILDYRGLTKLKTTYIDRLPERIDPDTGRVHSMFHQAVTATGRLSSSNPNLQNIPVR
TEEGRRIRKAFVASPGHKLVSADYSQIELRIMAHLSGDEGLLKAFEQGEDIHRATAREVF
ADGGEVSDEQRRAAKAINFGLIYGMSAFGLARQIGVGRTEAQDYIDRYFARYPGVARYMD
ETRARAHERGFVETVFGRRLYLPELKSRNGQRRQYAERTAINAPMQGTAADIIKRAMLAL
HANVVKTGRARMIIQVHDELIFEVPADEAISLADEIERTMIRAADLRVPLEVGIGIGESW
DEAH
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatcgaaacggacccgtgattctcgtcgacggcagttccttcctgttccgcgcc
tttcacgccctcccgccgctgaacgcgcccgatggcacgcccaccggggccatccacggc
gtggtcaacatgctcttgaagatgcggcgcgaggccgcgcccagccacatggcggtggtc
ttcgacgccccgggcaagacctttcgtgacgacatctaccccgactacaaggcccatcgg
ccgccgctgcccgacgacctgcgggtgcagatcgagccggtgcatgccctggtgcgcgcg
ctgggctttccgctgttgtgcgtggagggggtcgaggccgacgacgtgatcggcaccctg
atgcacgaggcgcgcgagaatggcgaggaggtgatcgtcgccaccgccgacaaggatttc
gcccagctggtcgcgcccggcgtcaccctggtcaacacgatgagcaacaagaccaccgac
gtggccgccgtcgaggagaaatacggcatccacccggggcagttcatcgattttctcgcc
ctggtgggcgacaaggtcgacaacatccccggcgtgcccggatgcgggccgaagaccgcg
accaagtggatcaaccagtatggttcgctcgacgggatcatccggcacgccgaggagatc
aagggcaaggtcgggcagtcgttgcgcgattcgcttgagttcctgcccatcagccgcgaa
ctggtcaccattcgcacggattgcgatctgccggtgaggctgaatgagttggtgatcgag
ccggccgacgtgcagaccgggttggcgctggccgatcgctacgggctcaactcgttgcgc
cgctggttcggtgagcagggtctcgtcgagggagagggcgtgaccgagacggtcgaacgt
cctgaggccgactatcgaaccatcaccgacgtagcggcgctcgaccagtggatcgagcgg
atcgaggcggcgccgcgcgtggccttcgacaccgagaccgattccctcgagccgatgcag
aatcgggtggtcggtctgtcgtttgccatcgatccgcacgaggcgatctacgtgccgctc
gcccacgtgggtgcccacggcgaacgggtcgagccgcagctcgatcgcgacgaggtgctt
gcccgcctcaagccgtggctggaggacgagcgccccaccaagatcctgcagaacgccaag
ttcgacatgcacgcgctcgccaaccacggcatcacgctcgccggactggtcgacgacagc
atgctcgagtcctacgtgctcgacccgaccgcctcgcgccacgacatggacacgctcgcc
tcccgcgagctctcgcaccagaccaccaccttcgaggagatcgcgggcaagggcgccaag
cagctgaccttcgaccagatcgagatcgacgtggccaccccctacgcggccgaggatgcc
gacatcaccctgcagctggccgaccgcctgcgcgcgagattggccgagacgccctcgttg
atggcggtctacgaggagatcgagcggccgctggtgccggtgctgttttccatggagcgc
gccggcgtggcgatcgacagcgagcagctggcgcgccagggcgaggcgattgccgaacgg
atcgcggcgatcgaatcgcaggcccacgagattgccggtgaggccttcaacctcggctcg
accaagcagctcaagtcgatcctgttcgagcgcatggggctgccggtgaaggtcaagacg
cccaagggcgagccgtcgaccaacgaggaggccttgtccgccctggtcgacgagcatccg
cttgcccagttgatcctcgactatcgcggcctgaccaagctcaagaccacctacatcgac
cggctgcccgagcgcatcgaccccgacaccgggcgcgtgcactcgatgttccaccaggcg
gtgaccgccaccgggcgcctgtcgtcatcgaaccccaacctgcagaacatcccggtgcgt
accgaggaggggcggcggattcgcaaggccttcgtcgcctcgcccggccacaagctggtc
tcggcggattactcgcagatcgagctgcgcatcatggcgcacctgtcgggggacgagggc
ctgctcaaggccttcgagcagggcgaggacatccaccgcgcgaccgcccgcgaggtgttc
gccgacggcggcgaggtcagcgacgagcagcggcgtgccgccaaggcgatcaacttcggg
ctgatctacggcatgtccgccttcggcctggcgcgccagatcggggtggggcgcacggag
gcgcaggactacatcgatcgctacttcgcccgttacccgggcgtggcgcgctacatggac
gagacccgggcgcgggcccatgagcgcggctttgtcgagacggtcttcggccgacgcctc
tacctgccggagctcaagagccgcaacggccagcgccgccagtacgccgaacgcacggcg
atcaacgcgccgatgcagggcacggcggccgacatcatcaagcgagcgatgctcgccctg
cacgcgaacgtggtgaagaccgggcgggcgcgcatgatcatccaggtgcacgacgagctg
atcttcgaggtgcccgccgacgaggcgatctcgctggcagacgagatcgagcgcacgatg
atccgggcggctgacctgcgcgtgccgctcgaggtgggcatcgggatcggcgagtcctgg
gacgaggcgcactga
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integrated database retrieval system
