Guyparkeria halophila: GM160_07495
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Entry
GM160_07495 CDS
T06369
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
ghl
Guyparkeria halophila
Pathway
ghl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ghl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GM160_07495 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghl03019
]
GM160_07495 (pcnB)
Enzymes [BR:
ghl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
GM160_07495 (pcnB)
Messenger RNA biogenesis [BR:
ghl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
GM160_07495 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
QGT78754
UniProt:
A0A6I6D5I2
LinkDB
All DBs
Position
complement(1653275..1654684)
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AA seq
469 aa
AA seq
DB search
MWGDAGHGEQWQTVLTDNVTATQTRIPAETHGISINDLSDNARFVLERLHEAGFEAYAVG
GCVRDLLRGRSPKDFDVVTDARPEEVKRLFKRARIIGRRFKIVHVVFRDELIEVTTFRGG
DAAEVKRADGGMITRDNVFGSIDEDVWRRDFACNALYLDFASGELVDYVEGLTDIHSGRL
RVIGEPEARYREDPVRMLRAARFAAKLGFHLTPDSEQAIAHCRETLADISPARLFDETVK
LLQGGAGRQTVLELKRLGLLEYLFDSLATWIEPNDPASDWVLIEPVLEATDERVAKDLPV
NPAFLFAGLFWRMLGRHRVQWMHQRVPMEDALVLAADEVLAVAARRLMIPRRLAEIIRAI
WALQPDLERHAPAANAPGKGKDADTLTEEQRALTEAPWFRAAVDFLCLRSRTNEVDESVC
TFWRRHAPERGSRDEAPIEALQPSDFGKKRRRRRPRRRKPGGKPQSANS
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgtggggcgacgccggccacggcgagcaatggcagaccgttttgacggacaacgtgaca
gcaacccagacccgaatacccgccgagacccacggcatctcgatcaacgacctgagcgac
aacgcccggttcgtccttgagcgactgcacgaggccggcttcgaggcctacgccgtcggc
gggtgcgtgcgcgatctcttgcgcgggcgcagccccaaggacttcgacgtggtcaccgac
gcgcgccccgaagaggtcaagcgcctgttcaagcgcgcgcggatcatcggccggcgcttc
aagatcgtccacgtggttttccgcgacgagctgatcgaggtgaccaccttccggggcggc
gacgccgccgaggtcaagcgcgccgacggcggcatgatcacgcgcgacaacgtcttcggc
agcatcgacgaggacgtctggcggcgcgatttcgcctgcaacgccctctacctcgacttc
gcctccggcgagctggtcgactacgtcgagggtctgaccgacatccatagcggtcgcctg
cgcgtgatcggcgagccggaggcccgctaccgcgaggacccggtgcggatgctgcgcgcg
gcacgctttgccgccaagctcggcttccacctcacgcccgacagcgagcaggcgatcgcg
cattgccgcgagacgctcgccgacatctcgccggcccgcctgttcgacgagaccgtcaag
ctgcttcagggcggcgccgggcgccagaccgtgctcgaactcaagcgcctcggtctgctc
gagtacctgttcgacagcctcgcgacctggatcgagcccaacgacccggccagcgactgg
gtgctgatcgagccggtgctcgaggccaccgacgagcgggtcgccaaggacctgccggtc
aacccggccttcctgttcgccggcctgttctggcgcatgctgggccgccaccgcgtccag
tggatgcaccagcgcgtgccgatggaggacgcgctcgtcctggccgccgacgaggtgctg
gccgtcgccgcccggcgcctgatgatcccgcgccgcctggccgagatcatccgcgcgatc
tgggcgttgcagccggacctcgagcgccatgccccggccgcgaacgccccgggcaagggc
aaggacgcggacacgctcaccgaggaacaacgcgcgctgaccgaggcaccgtggttccgc
gcggcggtggacttcctctgcctgcgctcgcgcaccaacgaggtcgacgagtcggtctgc
accttctggcgtcgtcacgccccggagcggggcagccgcgacgaggcgccgatcgaggcg
ctgcagccctcggacttcggcaagaagcgtcgccgccgtcgcccgcgccggcgcaagccg
ggtggcaagccgcagtccgccaacagctga
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