Guyparkeria halophila: GM160_07920
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Entry
GM160_07920 CDS
T06369
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ghl
Guyparkeria halophila
Pathway
ghl03030
DNA replication
ghl03430
Mismatch repair
ghl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ghl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GM160_07920 (dnaE)
03430 Mismatch repair
GM160_07920 (dnaE)
03440 Homologous recombination
GM160_07920 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ghl03032
]
GM160_07920 (dnaE)
03400 DNA repair and recombination proteins [BR:
ghl03400
]
GM160_07920 (dnaE)
Enzymes [BR:
ghl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GM160_07920 (dnaE)
DNA replication proteins [BR:
ghl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GM160_07920 (dnaE)
DNA repair and recombination proteins [BR:
ghl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GM160_07920 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
QGT78828
UniProt:
A0A6I6D1Q5
LinkDB
All DBs
Position
complement(1743378..1746902)
Genome browser
AA seq
1174 aa
AA seq
DB search
MSFVHLHVHSEYSLIDGTLRVKDAVKHAKERGMPAIALTDQGNLFAMVKFYKAALGAGIK
PIFGADCFVYENAQTPPSRVVLLAQNDTGFLHLTELLSQAYCEGQHDDRPCLNRDWLTPE
KTDGLIALIGVDSDLGRGLVHGLDHVVDEALAFWTVRFPDRLYLELTRTNRVNEGAFIES
AVDLAIAKDLPVVASNDVRFLDQSDFEAHEVRVCINQGRTLEDPRRPRDYSDRQYLRTAN
EMRELFADLPEAIDNSLAIAERCNVTLKLGENFLPNFPTPAGQTESDYLRELSAQGLEER
LKRVPAEDHQTYRERLERELDVIIQMGFPGYFLIVADFIQWAKRQDIPVGPGRGSGAGSI
VAWALLITDIDPMAYDLLFERFLNPERVSMPDFDIDFCMEGRDRVIDYVAERYGRDAVSQ
IATHGTMAAKAVVRDVGRVLGYPYGFVDRIAKLIPFKPGMDVSLDDALGRTEKSQKEPER
YSADLKEFYDRDEEVQAIVDMGRALQGLPRSVGKHAGGVLIAPSKLTDFTPMFCEANHAS
PASQLDKDDVEAVGLVKFDFLGLRNLTIIDWALKAINATREKAGEEPIDISAIPMDDPKS
FELLKRCETTAVFQLESKGMKGLIKKLQPDNFEEIIALVALFRPGPLDSGMVDDFILRKK
GEQQVEYLHPWLEEVLKPTYGVIVYQEQVMQIAQILAGYTLGGADLLRRAMGKKKPEEMA
KQRQIFLDGAKEKGVDVDEAGYIFDLVEKFAGYGFNKSHSAAYALVAYQTAWLKAHYPAY
FMAAVLSADMDNTDKVVGLIEECRRMELEVVPPSVQRCAYRFTAGGEREIVYGLGAIRGV
GEGVIQRIVEERAENGPFADMNDFCQRVGAGTLNKRVLEAMVCAGALDELGPSRAALHAH
IPEAMKAASQVATAAEAGMSDLFGGMDEPETAVASPIKPVPEWSDDERLRLEKNMLGLYL
TGHPINQYLDELTRFITGRLDVLTDKAESAAAAAGGGFVKGTPAVVAGLCVAERTMRTQS
GDKQLFITLDDGRGRGEMRLVGDDIEVLADRVGRDQLVIVEGDVSFDSFNGNLRIRHKRL
YTLGEARARFAQCVTIALTPDCGIEATERMLDIIEPFREAEGLPVIVEVQSELGRGAFRL
SDDWRVAPEATLMERLEELDTVGRAVAYYPRRVG
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgagtttcgtccacctgcacgtgcacagcgagtactcgctgatcgacggcaccctgcgt
gtcaaggacgcggtcaagcacgccaaggaacgcggcatgcccgccatcgccctgaccgac
cagggcaacctgttcgcgatggtgaagttctacaaggcagcactcggcgccggcatcaag
ccgatcttcggcgcggactgcttcgtctacgagaacgcccagaccccgccgtcgcgcgtg
gtgctgctcgcgcagaacgacaccggttttctgcatctgaccgagctcttgtcgcaggcc
tactgcgagggccagcacgacgaccggccctgcctgaaccgcgactggctcaccccagag
aagaccgacgggctgatcgcgctgatcggggtggacagcgatctcggtcgtggtctcgtc
cacgggctcgatcacgtggtcgacgaggcgctcgccttctggacggtgcgcttccccgac
cggctgtatctcgagctcacgcgcaccaaccgcgtcaacgagggcgcgttcatcgaatcc
gccgtggatctggccatcgcgaaggacctgccggtggtcgccagcaacgacgtgcgcttt
ctcgaccagtcggacttcgaggcccacgaggtgcgggtgtgcatcaaccagggccgtacg
ctcgaggacccgcgccgcccgcgcgactactccgaccgccagtacctgcgcaccgcgaac
gagatgcgcgagctgttcgccgacctccccgaggcgatcgacaacagcctggccatcgcc
gagcgctgcaacgtcacgctgaaactcggcgagaatttcctgcccaacttcccgaccccg
gccgggcagaccgagtcggattacctgcgcgagctctccgcgcaggggctggaagaacgc
ctgaaacgcgtgccggcggaagaccaccagacctaccgcgaacggctcgagcgcgagctg
gacgtcatcatccagatgggcttccccggctacttcctgatcgtcgcggacttcatccag
tgggccaagcgccaggacatcccggtcgggccggggcggggctcgggcgccggctcgatc
gtcgcctgggcgctgctgatcaccgacatcgacccgatggcctacgacctgctgttcgag
cggttcctcaaccccgagcgggtctcgatgcccgacttcgatatcgacttctgcatggaa
ggccgcgaccgggtgatcgactacgtcgccgagcgctacggccgcgacgccgtctcgcag
atcgccacccacggcaccatggccgccaaggcggtggtccgtgacgtcggccgggtgctg
ggctacccctacggcttcgtcgatcgcatcgccaagctgatccccttcaagccgggcatg
gacgtctcgctcgacgacgccctcgggcgcaccgagaagagccagaaggaacccgagcgt
tattcggccgacctcaaggagttctacgaccgcgacgaggaagtccaggcgatcgtcgac
atgggccgcgccctgcagggcctgccgcgctcggtgggcaagcacgccggcggcgtcttg
atcgcgccctccaagctcaccgacttcacgccgatgttctgcgaggccaaccacgcctcg
ccggcctcccagctcgacaaggacgacgtcgaggccgtcggcctggtcaagttcgacttc
cttggcctgaggaacctcaccatcatcgactgggcgctgaaggcgatcaacgccacgcgc
gaaaaggcgggcgaggagccgatcgacatctcggccatcccgatggacgaccccaagagc
ttcgagctgttgaagcgctgcgagaccaccgccgtgttccagctcgagtccaagggcatg
aagggcctgatcaagaagctccagccggacaacttcgaggagatcatcgccctggtggcc
ctgttccgcccgggcccgctcgattcgggcatggtcgacgacttcatcctgcgcaagaag
ggcgagcagcaggtcgagtacctccacccgtggctcgaggaggtcctcaagcccacctac
ggcgtgatcgtctaccaggagcaggtcatgcagatcgcgcagatcctggccggctacacc
ctgggcggcgcggatctcttgcgccgggcgatgggcaagaagaagcccgaggaaatggcc
aagcagcgccagatcttcctcgacggcgcgaaagagaagggtgtggacgtcgacgaggcg
ggctacatcttcgatctggtcgagaagtttgccggctacggcttcaacaagtcgcactcg
gccgcctacgcgctggtcgcctaccagaccgcctggctcaaggcccactacccggcgtac
ttcatggccgccgtgctctccgcggacatggacaacaccgacaaggtggtcggtctgatc
gaggaatgtcggcggatggagctcgaggtggtgccgccgtccgtgcagcgctgcgcctac
cgcttcaccgccggcggcgagcgcgagatcgtctacggcctcggcgcgatccgcggggtg
ggcgagggcgtcatccagcgcatcgtcgaggagcgcgccgagaacggcccgttcgccgac
atgaacgacttctgtcagcgcgtcggcgccggcacgctcaacaagcgcgtgctggaagcc
atggtctgcgccggggcgcttgatgagctcgggccctcacgggcggctctgcacgcccac
atcccggaggcgatgaaggcggccagccaggtcgccaccgccgccgaggccggcatgagc
gatctctttggcggcatggacgagccggagacggccgtggccagcccgatcaagccggtc
cccgagtggtcggacgacgagcgcctgcgcctcgagaagaacatgctcgggctgtacctc
accggtcacccgatcaaccagtacctcgacgagctcacgcgtttcatcaccgggcgcctc
gacgtgctgaccgacaaggccgagtccgccgcggcggccgccggtggcggctttgtcaag
ggcacgcccgccgtggtggccggcctgtgcgtcgccgagcgcaccatgcgcacccagagc
ggcgacaagcagctgttcatcaccctcgacgacgggcgcggccgcggcgagatgcgcctg
gtgggcgacgacatcgaggtgctcgccgaccgcgtcggccgcgaccagctggtgatcgtc
gagggcgacgtctccttcgattcgttcaacggcaacctgcgcattcgtcacaagcggctc
tacacgctgggcgaggcgcgggcgcgattcgcgcagtgcgtcaccatcgcgctcaccccc
gactgcggcatcgaggccaccgagcggatgctcgacatcatcgagccgttccgtgaggcg
gaggggttgccggtgattgtcgaggtgcagagtgagttggggcggggggctttccggttg
tcggatgactggcgggtggcgccggaggctacgttgatggagcggttggaggagttggat
accgttggtcgggcggtcgcgtattaccctaggcgagtgggatga
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