Guyparkeria halophila: GM160_08140
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Entry
GM160_08140 CDS
T06369
Name
(GenBank) siderophore biosynthesis PLP-dependent protein
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
ghl
Guyparkeria halophila
Pathway
ghl00300
Lysine biosynthesis
ghl00470
D-Amino acid metabolism
ghl01100
Metabolic pathways
ghl01110
Biosynthesis of secondary metabolites
ghl01120
Microbial metabolism in diverse environments
ghl01230
Biosynthesis of amino acids
Module
ghl_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ghl00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
GM160_08140
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
GM160_08140
Enzymes [BR:
ghl01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
GM160_08140
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Paralog
Gene cluster
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QGT78868
UniProt:
A0A6I6D1V0
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All DBs
Position
1801662..1802864
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AA seq
400 aa
AA seq
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MEFRLARMAQEANRLQAANDTPLCAYLYDLPALRQYVNDVITALPERCEMFYAVKANAET
PILDTLDGRVAGFEAASGGELALIRERFPTAPLVFGGPGKLVSELSLALDLGVELIHVES
LTELERLARLLEHGERRQAVLLRMNLRTDNLPSTSLTMGGTATPFGIDPDDLEACLAFLA
QHPKIELRGFHFHLVSHQLDADAHLRLLDDLFHQVEQWRKWYRLDIEEINVGGGIGINYR
TPERQFDWTGFCHGLERRLAEPPMQRYRIRFECGRYLTAPCGYYVMEVMDLKRNHGEWFA
VCRGGTHHFRTPAAQGHSHPFVQLSGGDGEKGLTDTTVTIVGQLCTPKDVLARRVEITHL
AIGDMLMFTFAGAYAWNISHQNFLRHPAPIMHFIDDGEDT
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atggaatttcgactagcccgcatggcccaggaggcgaatcgcctgcaagcggccaacgac
acgccgctgtgcgcctatctctatgaccttccggcgttgcgccaatacgtcaacgacgtc
atcactgcactgcccgaacgctgcgagatgttctacgcggtgaaggcaaatgccgagacg
ccaatactggacaccctcgacggccgggttgcgggatttgaggccgcgtcgggcggagag
ctggcgttgattcgtgaacgcttcccgacggctccgctcgtgttcggcgggccaggcaaa
ctggtctcggaactctcgctcgccctggatctcggtgtcgagctcatccatgtggagagc
ctcacagagcttgaacgtctagcccgcctcttggaacacggcgagcgccgccaagcggtc
ttgttgcgcatgaaccttcgcaccgacaacttgccctcgacatccctgaccatgggcggc
accgccacccccttcggcattgaccccgacgacctcgaggcctgcctcgctttcctcgcg
caacatcccaaaatcgagctgcgcggcttccattttcacctggtttcgcaccaactcgac
gccgacgcccatctgaggctgctcgacgatctgtttcaccaggtggagcaatggcgcaag
tggtatcgcttggatatcgaggaaatcaacgtcggcggcggcatcggcatcaattaccgc
acgcccgagcggcaatttgactggacaggcttctgccacgggctcgaacggcggctcgca
gagcctcccatgcaacgctatcgcattcgattcgaatgtggtcgctacttgaccgccccc
tgcggctattacgtaatggaggtaatggacctgaagcgcaaccacggcgaatggttcgcc
gtatgccgaggcggcacccatcacttccgcaccccggcagcgcaagggcatagccaccca
ttcgtgcaactgtccggtggtgacggcgaaaaagggctgaccgacaccacggtaaccatc
gtgggccagctgtgcactcccaaagacgtgctggcgcgccgagtcgagatcacccatcta
gccatcggcgacatgctgatgttcaccttcgccggcgcctacgcgtggaacatctcccat
cagaacttcctgcgccaccctgcacccatcatgcacttcatcgacgacggggaggacacc
tga
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