Guyparkeria halophila: GM160_10060
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Entry
GM160_10060 CDS
T06369
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
ghl
Guyparkeria halophila
Pathway
ghl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ghl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GM160_10060 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ghl03400
]
GM160_10060 (uvrB)
DNA repair and recombination proteins [BR:
ghl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GM160_10060 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GM160_10060 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
UB2H
DUF87
AAA_22
Kinesin
Microtub_bd
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
QGT79204
UniProt:
A0A6I6D6T0
LinkDB
All DBs
Position
2238101..2240149
Genome browser
AA seq
682 aa
AA seq
DB search
MSEHRFQIATDYQPAGDQPRAIETLVEGLNDGLMHQTLLGVTGSGKTFTMANVINEVQRP
AMVLAPNKTLAAQLYGELKGFFPHNAVEYFVSYYDYYQPEAYVPASDTFIEKDASVNEHI
EQMRLSATKALFERRDVIIVATVSSIYGLGDPEAYLKMILHLVRGDHVTQRQIVRRLAEM
QYTRNDMEFRRGTYRVRGDVIDIHPAEADDEGVRIELFDDEIEQITLFDPLTGQVRRRVP
RYTVYPSSHYVTPRERLLHAIEQIKVELGERLEDLESQNKLVEAQRLAQRTRFDIEMIQE
LGYCNGIENYSRYLSGRQPGEPPPCLYDYLPSDALLIIDESHVTVPQLGGMYKGDRSRKE
TLVNFGFRLPSALDNRPLKFEEFERLMPQTVYVSATPGPYEEAHADQVAEQVVRPTGLVD
PQIEVRPVASQVDDLLSEIRLRAEKNQRVLVTVLTKRMAEDLTDYLMEHDVRVRYLHSDI
DTVERVEIIQDLRLGEFDVLVGINLLREGLDIPEVSLIGILDADKQGFLRSERSLIQTIG
RAARNLEGKAILYGDTITDAMRKAIDETERRREKQLAHNEAMGITPRGIEKSVQDILEAG
ESRIPGARPGRKRRGADKAAEAPADYATLSPDQAAKRIKQLESDMHRHARDLEFEAAAQA
RDELQKLKEAFFGATEPGYSDD
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaacaccgtttccagatcgcgacagactaccagccggccggcgaccagccccgc
gccatcgagaccctcgtcgagggcctcaacgacgggctgatgcaccagaccctgctcggg
gtgaccggctcgggcaagaccttcacgatggccaacgtgatcaacgaggtgcagcgcccg
gcgatggtgctcgcgcccaacaagacactggccgcgcagctgtacggcgagctgaagggc
ttctttccgcacaacgcggtggagtatttcgtctcctactacgactactaccagcccgag
gcctacgtgccggcctcggacaccttcatcgagaaggacgcctcggtgaacgagcacatc
gagcagatgcgcctgtcggccaccaaggcgctgttcgagcgccgcgacgtgatcatcgtc
gccaccgtgtcgtcgatctacggcctgggcgaccccgaggcctatctcaagatgatcctg
cacctggtgcgcggcgatcacgtcacccagcgccagatcgtccgccggctggccgagatg
cagtacacccgcaacgacatggaattccgccgcggcacctaccgcgtgcgcggcgacgtg
atcgacatccacccggccgaggccgacgacgagggcgtgcgcatcgagctgttcgacgac
gagatcgagcagatcacgctgttcgacccgctcaccggccaggtgcgccgccgggtgccg
cgctacacggtctacccctcctcgcactacgtcacgccgcgcgagcggctgctgcacgcg
atcgagcaaatcaaggtcgagctgggcgagcgcctcgaggacctcgaatcgcagaacaag
ctggtcgaggcgcagcggctggcccaacgcacccgcttcgacatcgagatgatccaggag
ctcggctactgcaacggcatcgagaactactcgcgctatctctccgggcgccagccgggc
gagccgccgccgtgtctctacgactacctgccgtccgatgcgctgctgatcatcgacgag
tcccacgtgaccgtcccgcaactgggcggcatgtacaagggcgaccgttcgcgcaaggaa
acgctggtcaacttcggtttccgcctgccctcggcgctggacaaccggccgctgaagttc
gaggagttcgagcgactgatgccgcagaccgtctacgtctcggccacgcccggcccctac
gaggaggcgcacgccgaccaggtcgccgagcaggtggtccgccccaccgggctggtcgat
ccgcagatcgaggttcgcccggtcgcgagccaggtcgacgacctgctctccgagatccgc
ctgcgggccgagaagaaccagcgggtgctggtcaccgtgctcaccaagcgcatggccgag
gacctgaccgactacctgatggagcacgacgtgcgcgtgcgctacctgcactcggacatc
gacacggtcgagcgcgtcgagatcatccaggacctgcgcctgggcgagttcgacgtgctg
gtgggcatcaacctgctgcgcgaggggctcgacatccccgaggtgtcgctgatcggcatc
ctcgatgccgacaagcagggtttcctgcgctcggaacgctcgctgatccagaccatcggc
cgggccgcgcgcaacctagagggcaaggcgatcctgtacggcgacaccatcacggatgcc
atgcgcaaggcgatcgacgagaccgagcgccgccgcgagaaacagctggcacacaacgag
gcgatgggtatcacgccacgcggcatcgagaaaagcgtccaggatatcctcgaggccggc
gaatcccggatccccggcgcccgcccggggcgcaagcgtcgcggggcggacaaggcggcc
gaggcgccggccgactacgccaccctgtcacccgaccaggccgccaagcggatcaagcag
ctcgagtccgacatgcatcggcatgcccgcgacctggagttcgaggcggccgcccaggcc
cgagacgaacttcagaagctcaaggaagccttcttcggcgccaccgaaccgggctacagc
gacgattga
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integrated database retrieval system
