Guyparkeria halophila: GM160_11605
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Entry
GM160_11605 CDS
T06369
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
ghl
Guyparkeria halophila
Pathway
ghl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ghl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GM160_11605 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ghl03021
]
GM160_11605 (rho)
03019 Messenger RNA biogenesis [BR:
ghl03019
]
GM160_11605 (rho)
Transcription machinery [BR:
ghl03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
GM160_11605 (rho)
Messenger RNA biogenesis [BR:
ghl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
GM160_11605 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
AAA_25
AAA_22
OB_RNB
S1CSD-TOTE-2
AAA
Mor
Motif
Other DBs
NCBI-ProteinID:
QGT79468
UniProt:
A0A6I6D3Q9
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All DBs
Position
2562214..2563473
Genome browser
AA seq
419 aa
AA seq
DB search
MNLTELKSKPVPELMELAQSMGLDNIARTRKQDVIFALLKAHAKTGESIHGDGVLEILSD
GFGFLRSADGSYLAGPADIYVSPSQIRRFNLQTGDTISGTIRPPKDNERYFALLKIEKIN
LEKPEASKTKILFGDLTPLHAEKRMRMERGNGSTEDLTARIIDIVAPIGKGQRGLIVAPP
KAGKTMLLQNIAQSITHNHPECDLIVLLIDERPEEVTEMQRTVRGEVVASTFDEPAPRHV
QVAEMVIEKAKRLVEHKRDVVILLDSITRLARAYNTVVPSSGKVLTGGVDANALHRPKRF
FGAARNVEEGGSLTILATALVDTGSKMDEVIYEEFKGTGNMELHLDRRIAEKRVYPAINI
NRSGTRREELLTDTEELQKMWILRKFLHPMGELEAVEFLLDKLQQTKTNNEFYDSMRRG
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaatctaaccgaactcaagagcaagcccgttccggaactcatggagctggcccagtcg
atgggactggacaacatcgcccggacacgcaagcaggacgtgatcttcgccctgctcaag
gcgcacgccaagacgggcgaatcgatccacggcgacggcgtactggagatcctctcggac
gggttcggttttctgcgcagcgccgacggctcctacctcgccggcccggccgacatctac
gtctcgccctcgcagatacggcgcttcaacctgcagaccggcgacaccatcagcggcacg
atccgcccgccgaaggacaacgaacgctacttcgcgctgctgaagatcgagaagatcaac
ctcgagaagcccgaagcctccaagaccaagatcctgttcggtgacctcaccccgctgcat
gccgagaagcgcatgcgcatggagcgcggcaacggctcgaccgaggacctgaccgcccgg
atcatcgacatcgtcgcgccgatcggcaagggccagcgcggcctgatcgtcgccccgccg
aaggcgggcaagacgatgctcctgcagaacatcgcccagagcatcacccacaaccacccc
gagtgcgacctgatcgtgctgctgatcgacgagcgcccggaagaggtcaccgagatgcag
cgcaccgtgcgcggcgaggtggtcgcctcgaccttcgacgaaccggccccgcgccacgtg
caggtcgccgagatggtgatcgagaaggccaagcgcctggtcgagcacaagcgcgacgtg
gtgatcctgctcgactcgatcacgcgcctggcgcgcgcctacaacaccgtggtgccgtcc
tcgggcaaggtgctcaccggcggcgtggacgccaacgccctgcaccggcccaagcgcttc
ttcggcgccgcgcgcaacgtcgaggagggcggcagcctgaccatcctcgccaccgcgctg
gtcgacaccggttcgaagatggacgaggtgatctacgaggaattcaagggcaccggcaac
atggagctccacctcgaccggcggatcgcggaaaagcgcgtctacccggcgatcaacatc
aaccgctcgggtacccgtcgcgaggagctgctcacggataccgaggagctgcagaagatg
tggatcttgcgcaagttcctccacccgatgggcgagctcgaggcggtggaattcctgctc
gacaagctgcagcagaccaagaccaacaacgagttctacgattcgatgcgtcgcggctga
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