Gleimia hominis: CJ187_005345
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Entry
CJ187_005345 CDS
T09100
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ghm
Gleimia hominis
Pathway
ghm03420
Nucleotide excision repair
ghm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ghm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CJ187_005345
03430 Mismatch repair
CJ187_005345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ghm03400
]
CJ187_005345
Enzymes [BR:
ghm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CJ187_005345
DNA repair and recombination proteins [BR:
ghm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CJ187_005345
MMR (mismatch excision repair)
Other MMR factors
CJ187_005345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_11
AAA_30
Viral_helicase1
ResIII
Pescadillo_N
CarD_TRCF_RID
Motif
Other DBs
NCBI-ProteinID:
WIK65413
LinkDB
All DBs
Position
complement(1200669..1203347)
Genome browser
AA seq
892 aa
AA seq
DB search
MNNDRTFASQLPGLPALTDQMLAGQVPAGSPGQFSPAAPQFSPEANGPGGGSGTAFGGPS
GGAADPAELLEGLNAQQREAVEYAGGPLLVVAGAGSGKTRVLTHRIAYLLRTGRAQPGQI
LAITFTNKAAAEMRERVTQLVGPNAARMWVFTFHAACVRILRESHEAAGLRSTFSIYDTQ
DSQQLLNVILKDKQVDTKRFAAKMLRGRISDLKNELITAQQYAKTAPNDPISRVVEEVYP
EYQRRLENANALDFDDLIMRTVQMLQSKPAVAQHYRRRFQHVLVDEYQDTNHAQYVLIRE
LIGADEQQQGELTVVGDSDQSIYAFRGATIRNIEEFEKDFPGAHTVLLEQNYRSTQNILS
AANAVIAANKGRRAKNLWTGRGDGAPVVYDAANSEHDEARFVIAEIDKLTDSTYHYGDIA
VFYRTNAQSRALEEMLVRSGIPYRVVGGTKFYERKEIKDALAYLASVSNPDDTVALRRIL
NTPRRGLGAKAEQTLVAHAAALNANLGDALRDAWVQAGCPRGEGSEIDLEETAWADAVAQ
EKARASGREISLTSRALKQAAGFYGLLVSLRTYADAGASIAELLDEAMEATGYLVQLRES
EDPQDASRVENLAELHAVAADFKKTNPQGSLADFLERVSLVADSDQVAGAEDSGEVTLMT
VHTAKGLEFPVVFVTGMEDGTFPHQRSLLDEWELSEERRLAYVAFTRAREKLYLTRAAVR
TTWGTPSDLPPSRFLDDVPLEVLEVRRGSTQMDSYRTGGSGGSFGGFSNAVRGRGSFGGS
STDPWEDDFAPAIGSGGGLSARGFKRTGSRGPRAGMTSGTAGGGLKRLGVSKKDADKPKV
ALKIGDRVKHGSYGEGTVVGLEGAGASQVAKVDFGDAKPRRLLLRYAPIKKI
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atgaataacgaccgtactttcgcttcgcaactaccgggtctaccggccttgaccgaccag
atgctcgccgggcaggttcccgcgggttcaccgggccagttttcaccagcggccccccag
ttttcccctgaggcaaatgggccgggcggggggagcggaaccgctttcggtgggccaagc
gggggagcggcggacccggcggaactgttagaagggttgaacgcccagcagcgcgaggcc
gtggagtacgccgggggaccacttttggttgtggcaggcgcggggtcggggaaaacccgg
gtgctcacccaccggatcgcgtacctgctgcgcaccgggcgggcccagcccgggcagatc
ctcgcgatcaccttcaccaacaaggctgcggcggaaatgcgcgaacgcgtgacccaactc
gttggtcccaacgcggcacgcatgtgggtgttcaccttccacgcggcgtgcgtgaggatt
ctccgggaatctcacgaggccgctggcctgcggtctacgttcagtatctacgacacgcaa
gactcgcagcagctgttgaacgtgatcttaaaagataagcaggtggacaccaaacggttc
gccgcaaaaatgctacgcggacgcatctcggacctcaagaacgaactcatcacagcccag
cagtacgccaaaaccgcgcccaacgacccgatttcacgagttgtcgaagaagtgtatccg
gaataccagcgtcggctagagaacgcgaacgcactagattttgacgacctcataatgcgt
acggtgcagatgctgcaatcaaaacccgcggtggcgcagcattaccggcgccgcttccaa
cacgtgctggttgacgaataccaggacacgaaccacgcgcaatacgtgctgatccgcgaa
ctcattggggcagatgagcagcagcagggtgaactcaccgtggtgggggattcggaccag
tcaatctacgcgttccgcggcgccacaatccgcaacattgaggagtttgaaaaagacttc
cccggcgcgcacaccgtgctgctagaacagaactaccggtctacccaaaacattctgagc
gccgctaacgcggtgattgctgcgaataaggggcggcgggcgaaaaacctgtggaccggc
cggggcgatggagcgcccgtagtgtatgacgccgctaattccgaacacgacgaagcccgg
ttcgtgatcgcagaaatcgacaagctcaccgattcaacctaccactacggtgatatcgcc
gtgttttaccgcactaacgcgcagtcgcgggctctggaggaaatgctcgtgcggtccggc
attccctaccgcgtggtgggcggcaccaagttctatgaacgcaaagaaatcaaagatgcg
ctcgcctacctcgcgtccgtgtccaaccccgacgacacggtagcgctgcgccgcatcctc
aacacaccccgccgcggtctgggcgccaaagcggaacaaactctcgtggcccacgccgct
gccctcaacgcgaacctgggggatgcgctgcgtgacgcgtgggtacaggcggggtgtccg
cgcggtgaaggtagtgagattgacctggaggaaaccgcgtgggcggatgcggtggcgcaa
gaaaaagcgcgtgcttccgggcgggaaatatcacttacctcgcgcgcattaaaacaggcc
gcgggtttctacgggctcctggtttccctgcgcacgtatgcggatgcgggcgcctctatc
gccgagttgctggacgaggcgatggaagccaccgggtacctggtgcaacttcgagaatcc
gaagaccctcaggacgcatctagggtagaaaacctggcggaactacatgcagtggcggca
gattttaagaaaactaacccacaggggtcgctcgcggactttttggaacgcgtgtccttg
gtggcggattcggaccaggttgcgggcgcggaagacagcggggaggtcaccttgatgacc
gtgcacactgcgaaaggactcgagttccccgtcgtgttcgtaaccggtatggaagatggc
acgttcccccaccaacggtccctgttggacgagtgggaattgtctgaggaacggcgcctc
gcgtacgtggcgttcacgcgggcgcgggagaaactgtatttgacgcgcgcggctgtgcga
accacgtggggaaccccttctgatttaccgccctcgcgttttcttgacgacgttcccctt
gaggtactggaggttcgccgtggttccacgcagatggatagttaccgaaccgggggttcg
ggtgggtccttcggcgggttctctaacgccgtccgcgggcgcggcagctttggcggtagt
agcactgacccgtgggaggatgattttgcccctgcgatcggttccggagggggcctgtcc
gcccggggattcaaacgcaccggtagtcgcgggccgcgcgctgggatgacgagtggaact
gcaggaggcggattgaaacgcctgggggtgtcgaaaaaagacgcggataaacccaaggtc
gcattgaagattggggatcgggtgaagcacggttcctacggtgaaggcacggtagttggc
ttggagggggcgggtgcgtcgcaagtggcaaaagtggatttcggtgacgccaaaccacgg
cgcttactgttgcgttacgcgccgattaagaagatctga
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