Gordonia hongkongensis: MVF96_02035
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Entry
MVF96_02035 CDS
T08182
Name
(GenBank) PD-(D/E)XK nuclease family protein
Organism
ghn
Gordonia hongkongensis
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Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
FAN1_TPR
Motif
Other DBs
NCBI-ProteinID:
UPG68674
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Position
459153..461954
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AA seq
933 aa
AA seq
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MPPIDLLAEAVMRMKAGAPLAKVSVVVPDHGSGRDVLHSLARAGSVASTSVLTLQQVVSN
LAGPTLAPRLALAYPLLEAAIARVLADVPGVFTDVADQSITAQALAGAAWELTAIDEPRV
DSPTPLVADLLRVYRAAIERLITRYYLPHEAYAIAVERLADLGAVIVYHPVSRTRAEQKL
LRALQQHGETVEQAVTVSPTRIIHTSDADDEVRAVVRLVRKHLAGGTPGHRIGVFYGSDD
PYLPLLHEHLTAGHIAFTGPECHTLVDRPTGRALLGLLKLDLDGMPRRELFTLLAGGAVR
RPEIDDDPISQRRLERLTREDEPIVGGADWERLTRVGAHEEHHAMAVALYTYVRQLQADL
HAIVEAPDWTTAAGRLVALVDRYFRTPTREVAAADFATTRADCISLAGMDGIAPPPNAAR
VLDAVSVRLTAHRTMHGDSGAGVTIGPIAAGAGRDLDVSVVMGSAEGIIPAPRRDDPLLP
AELTGITARERMERQRIAFASAVSTGRTERIVTFPRGNLRGGAERVPSRWLIPAMGGLAG
RDVNVVNWQRETENVEPIVAVESFDVAAQRADDRIGASAASDTEWRLRELAAVPADQRRG
ALDDPIINLGMNLRSDRLNGRFTRFNGNLSTVKELITTFDRPVSPTGLELWVQSPYQYFL
EHILQLRALGDPDEVAQIDALTRGTLIHTILERYVLDTIDGAELDLARLHLVAHEVLDEA
QANSPGWLEQLWAKDRGIMLRDLADWHKHNRADQDDGWRPTHAEQTFGTDSAAEVSLALG
DNRIRFRGQIDRIDRHSGGRIRVTDYKTGKGDKYKDLSDVAPTNSGLQFQLPVYGLFART
LGADVEARYWFVTSTGKFASIGYPVTDDVIATLIDDMALVHRSILAGHFPPKVEDTHWEL
PVIDLLGRAGLRRAWAALEDVDEIADYVRKYGG
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atgcccccgatcgacctcctggccgaagctgttatgcggatgaaagctggtgcgccactc
gccaaggtcagtgtcgtcgtgcccgaccacggctccggacgggatgtcctccacagtctg
gctcgagcagggtccgtggccagcactagcgttctcacgcttcagcaagtcgtctcgaat
ctcgcgggtccaactctcgcacctcgcctggcactcgcatatccactgctggaagccgcg
attgcgcgagtcctcgccgacgtcccgggagtcttcaccgacgtcgccgaccaatccatc
acggcgcaagccctcgccggcgcggcttgggaactcaccgcaatcgacgagccgcgggtg
gactcaccgacgcccctggtcgccgacctcctccgcgtatatcgcgcagcgatcgagcgt
ctgatcaccaggtactacctcccgcacgaggcgtatgcgattgcagttgaacgtctggcc
gacctcggcgcggtgatcgtctaccaccctgtcagcaggacccgcgccgagcagaagctc
ctgcgtgcactccaacaacacggtgagaccgtcgaacaggcggtcaccgtctcgccaacc
cggatcatccacacctctgacgccgacgacgaggtcagagccgttgtccgcctcgtgcgc
aagcatctggccgggggcacacccggccaccgcatcggcgtcttctacggcagcgatgac
ccatacctaccactgctccacgaacacctcaccgccggtcacatcgccttcaccgggccc
gaatgccacacgctcgtcgacagacccaccggccgtgcactactcgggctgctcaagctc
gacctcgacgggatgccgcgccgcgaactcttcaccctcctcgccgggggtgcagtccgg
cgccccgaaatcgacgacgacccgatctcgcaacgtcggctcgaacgcctcacccgcgag
gacgaacccatcgtcggcggcgccgactgggaacgactcacccgtgtcggtgcacatgaa
gagcatcatgcgatggccgtagcgctgtacacgtacgtcagacagctgcaagccgacctg
cacgccatcgtcgaagcgcccgactggaccaccgcggccggacggctggttgcactggtc
gaccgctacttccgtacacccacgcgcgaggtcgctgcggccgactttgccactacccgg
gccgactgcatcagccttgccggcatggacggcatcgcaccgccgccgaacgctgcgcgc
gttctggatgcggtcagcgtgcgcctgactgcgcaccgaacaatgcatggagactccggc
gcaggcgtgaccatcggaccgatcgccgcgggcgccgggcgcgacctggacgtcagtgtc
gtcatgggcagcgctgaagggatcatccccgcaccccgccgcgacgatccgctgctacct
gcagaactcaccggcatcaccgcccgcgagcgtatggaacggcaacgtatcgccttcgcg
agtgcggtcagcacagggcgcacggaacggatcgtcacgttcccccgcggcaacctgcgc
ggtggcgcggagagggtgccgtcacgatggctcatcccggcgatgggcggactggccggt
cgtgacgtcaatgtcgtgaactggcaacgcgaaaccgagaacgtggagccgatcgtcgcg
gtcgaatctttcgacgtcgccgcccagcgcgccgacgaccgaataggtgcatcagccgca
tccgacaccgaatggcggctccgcgagctcgcagccgtccccgccgatcaacgccgcggc
gccctcgacgacccgatcatcaacctcggcatgaacctgcgcagcgaccgcctgaacggc
cgcttcacccggttcaacggcaacctgtcgacggtcaaggagctgatcaccaccttcgac
cgcccggtgtcgccgaccggtctcgaactctgggtgcaaagtccctatcagtacttcctc
gaacacattctgcagctccgtgcgctgggcgaccccgacgaggtcgcccagatcgacgcc
ctcacccgcggcactctcattcacacgatcctcgagcgctacgttctcgacaccatcgac
ggcgccgaactggacctcgcccgtctgcacctcgtcgcccatgaggtactcgacgaagcg
caggccaacagtcccggctggctcgagcaactgtgggccaaagaccgcggcatcatgctc
cgcgatctcgccgactggcacaagcacaaccgcgccgaccaagacgatggctggcgcccg
acgcacgctgaacagacattcggcaccgactcggcagccgaggtgtcactggcgctcggc
gacaacagaatccgcttccgcggccagatcgatcgcatcgaccgacacagcggcggccgc
atccgcgtcaccgactacaagaccggcaagggtgacaagtacaaggacctttccgacgtc
gctcccaccaattcggggctacagttccagctccccgtctacggactgttcgcccgcacg
ctaggagccgacgtcgaggcccggtactggttcgtgacctccacaggcaagttcgcctcc
atcggctatcccgtcaccgacgacgtcatcgcgaccctgatcgacgacatggccctcgtc
caccgctcgattctcgccggccacttcccgcccaaggtcgaggacacacactgggagctg
ccggtcatcgacctcctcggccgcgccggactccgccgtgcctgggctgcgttggaggac
gttgacgaaatcgccgactatgtacggaagtacggaggctga
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