Gordonia hongkongensis: MVF96_04505
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Entry
MVF96_04505 CDS
T08182
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
ghn
Gordonia hongkongensis
Brite
KEGG Orthology (KO) [BR:
ghn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ghn03400
]
MVF96_04505 (radA)
DNA repair and recombination proteins [BR:
ghn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
MVF96_04505 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
DUF7125
ChlI
DnaB_C
AAA_22
Lon_C
AAA_16
AAA_30
AAA
RecA_N
GvpD_P-loop
nSTAND_NTPase5
AAA_19
nSTAND3
NACHT
DUF7129
ABC_tran
AAA_29
Zn_ribbon_8
DZR
NTPase_1
AAA_14
AAA_24
SLFN-g3_helicase
NPHP3_N
Zn_Ribbon_1
AAA_5
AAA_18
NB-ARC
RsgA_GTPase
DAP3
HypA
ATPase_2
Motif
Other DBs
NCBI-ProteinID:
UPG69107
LinkDB
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Position
complement(979042..980421)
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AA seq
459 aa
AA seq
DB search
MARTKTSFRCTACGHQVPKWVGRCPECGEWGTIGEVAGPAPSARSTAAVAPSSPALRITE
VDAESSAAIPTGIGELDRVLGRGVVPGSVILLAGEPGVGKSTLLLEAVKHWAAQDRTALY
ITGEESAGQVRMRAERTGAVHPNVYLAAETDLATILGHVDSVAPSLMIVDSVQTLVASGA
DGVTGGVTQIRAVTTALVSLAKNRGVAVILVGHVTKEGAVAGPRSLEHLVDVVLAFEGDR
HSTLRMVRGVKNRFGAADEVGCFEQRDDGIHQVPDPSGIFLHQRDSDVSGSATLVTMDGK
RALVGEVQALANGTEMNIPRRAVSGLDMNRVSMVLAVLQARGGLKQIAKSEVYLSTVGGM
RVTEPAADLAIALAVYSTVKNQPIPQSTVVVGEVGLGGEVRRVSAVARRLAEAKRLGFRE
AIIPAATDEELPTGIRILRVANLGDAVGLRDADPVDAPF
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
gtggccagaaccaagacgtccttccgctgcaccgcgtgtggccatcaggtgcccaagtgg
gtgggccgctgccccgagtgcggcgaatggggcacgatcggcgaggtggccgggccggca
ccgtcggcgcgctcgaccgcggcggtcgcaccgtcgagccccgctctgcgcatcaccgag
gtcgacgccgaatcgtccgccgcgatccccacgggcatcggcgagctcgaccgggtgctg
ggccgcggcgtcgtcccgggctcggtcatcctgctggccggtgagcccggcgtcggcaag
tcgacgctgctgctcgaagccgtcaaacactgggcggcacaggaccgcaccgcgctctac
atcaccggtgaggaatctgccgggcaggtccgcatgcgggccgagcgcaccggcgcggtg
cacccgaacgtctacctggccgccgagaccgacctcgcgacgatcctcggccacgtcgac
tccgtcgcgccgtcactcatgatcgtcgactcggtccagaccctcgtcgcctccggggcc
gacggcgtcaccgggggcgtgacccagatccgggcggtgacgaccgcactggtctcgctc
gccaagaaccgcggggtcgcggtcatcctcgtcggccacgtcaccaaggagggcgcggtc
gccgggccgcggtcgctggagcacctcgtcgacgtcgtactcgcgttcgagggtgaccgg
cactcgacgctacgcatggtccgcggtgtcaagaaccggttcggggcggccgacgaggtg
gggtgtttcgaacagcgcgacgacggcatccatcaggtcccggatccctccggaatcttt
ctgcatcaacgtgattcggatgtgagcggcagcgcgaccctggtgaccatggacggcaaa
cgcgcactggtgggcgaggtccaggcgctggcgaacggcaccgagatgaacattccgcgc
cgggcggtctccggcctggacatgaaccgcgtctcgatggtgctcgcggtcctgcaggca
cgcgggggtctgaaacagatcgcgaagagcgaggtgtatctatccacggtgggcggcatg
cgcgtgaccgagccggccgccgatctcgcgatcgcgctcgctgtgtactccacggtgaag
aaccagccgatcccgcagtcgacggtggtcgtcggcgaggtcgggctcggcggtgaggtc
cgtcgtgtctcggccgtcgcgcgccgactcgccgaggcgaagcgactcggcttccgggag
gcgatcatccccgcggccaccgacgaggaactgccgacgggcatccggatcctgcgtgtg
gcgaacctcggcgacgccgtcggtctccgcgacgccgatccggtggacgcgcccttctga
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