Gordonia hongkongensis: MVF96_06680
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Entry
MVF96_06680 CDS
T08182
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ghn
Gordonia hongkongensis
Pathway
ghn03420
Nucleotide excision repair
ghn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ghn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MVF96_06680
03430 Mismatch repair
MVF96_06680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ghn03400
]
MVF96_06680
Enzymes [BR:
ghn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MVF96_06680
DNA repair and recombination proteins [BR:
ghn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MVF96_06680
MMR (mismatch excision repair)
Other MMR factors
MVF96_06680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
DEAD
Motif
Other DBs
NCBI-ProteinID:
UPG69487
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Position
1468591..1471092
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AA seq
833 aa
AA seq
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MNSSSSAPLLAGRAGAAPSGAAADDRVTRLLDGLNPQQRAAVLHAGAPLLIVAGAGSGKT
AVLTRRIAYLLAARGVTPGQILAITFTNKAAAEMRERVIDLVGPRAAYMWVSTFHSTCVR
ILRAQSGLLEKMNSNFSIYDADDSKRLFGMVIRDLDLDPKKFSPRGVSVAVSNFKNELIS
PDEALSAAPEDDPTSTTIAQIYAEYQRRLRAANAFDFDDLIGETVALLHRHPQVAEYYRR
RFRHVLVDEYQDTNHAQYVLIRELVGEQTTASGLEPSELCVVGDADQSIYAFRGATIRNI
EEFERDFPSAETVLLEQNYRSTQTILSAANAVIARNSNRREKKLWTDSGDGELIVGYVAD
SDRDESTFIAKEIEELTDYSIGGSSSHKYSDIAVFYRTNTGSRAIEEVFVRHGIPYKVVG
GTKFYERKEVRDVVAYLRVVANPDDSVSLRRILNTPRRGIGDRAEACVAVHSENTGRSFY
ESLMDAAEGKVALLNTRAVKQIGGFVELIEGLRSDFLTHFGEAGTEDADVAFLDATEESA
DIGELVDAIVERTGYRAELEASNDPQDGARLDNINELVAVAREFSADAAQVDADADDPEV
EVDREGEPEPGSLAAFLERVSLVADADQVPDEGEGVVTMMTLHTAKGLEFPVVFVTGWED
GHFPHMRALGDPAELSEERRLAYVGITRAKQRLYLTRSVTRASWGQPVSNPESRFLQEIP
QHLVDWRRTEPKRSMRGFSGSSGGVFGRDGAFSGSGGSSMGRGRSSYSSDPARGRNKQVQ
LDIGDRHNHPKYGMGKVVAKEGSGATERVTIDYGGSAGRVTLLTAGGIPGDKL
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atgaacagctcttcttctgcccctcttctcgccggtcgcgcgggcgccgctccctcgggt
gcggccgccgacgaccgggtcacgcgcctgctcgacggtctcaacccgcaacagcgcgcc
gcggtgctccacgccggcgcgccgttgctgatcgtggcgggcgcgggctcgggcaagacg
gcggtgctgacccgccggatcgcctacctgctcgccgcgcggggcgtcacgcccgggcag
atcctggccatcacgttcaccaacaaggccgccgcggagatgcgcgagcgggtcatcgac
ctcgtcggcccccgcgccgcctacatgtgggtctcgacctttcactccacatgcgtgcgc
atcctccgggcccagtcggggttgctggagaagatgaactccaacttctccatctacgac
gccgacgactcgaagcggttgttcggcatggtcatccgtgatctcgacctcgaccccaag
aagttcagcccacgcggggtgtcggtggccgtgtcgaacttcaagaacgaactgatctcg
cccgacgaagcgctgtccgccgcacccgaggacgacccgacctcgacgacgatcgcgcag
atctacgccgagtaccagcgccgtctgcgcgccgcgaacgccttcgacttcgacgatctg
atcggggagaccgtcgcgctgctgcatcggcatccccaggtcgcggagtattaccggcgc
cggttccgtcacgtcctcgtcgacgagtaccaggacaccaaccacgcgcagtacgtgctc
atccgcgaactggtgggggagcagaccaccgcgagtggtctcgagccgtcggagctgtgc
gtcgtcggcgacgccgaccagtccatctacgccttccgcggtgccaccattcgcaacatc
gaggagttcgagcgggacttcccgtccgccgaaaccgttctgctcgaacagaactaccgg
tcgacacagacgattttgtccgcagccaacgccgtcatcgcgcgcaactcgaaccggcgc
gagaagaagttgtggaccgactccggggacggcgaactcatcgtcggctacgtcgccgac
tccgaccgcgacgagtcgacgttcatcgccaaggagatcgaggagctcaccgactactcg
atcggcgggtcgtcgagtcacaaatactccgacatcgcggtgttctaccgcaccaacacc
ggctcgcgtgcgatcgaggaggtgttcgtccggcacgggattccgtacaaggtcgtcggc
ggcaccaagttctacgagcgcaaagaggtgcgggatgtggtggcctacctgcgggtggtc
gccaaccccgacgactcggtcagcctgcgccggattctcaacacgcctcggcgcggtatc
ggtgatcgcgcggaagcctgcgtcgccgtgcattcggagaacaccgggcggagcttctac
gagtcgctgatggacgcggccgagggcaaggtcgcactgctcaacacccgggcggtcaag
cagatcggcgggttcgtcgaactcatcgaagggctccggtcggacttcctgacccacttc
ggcgaggccggcacggaggacgcggatgtggccttcctcgatgccaccgaggagtcggcc
gacatcggtgagctcgtcgacgcgatcgtcgagcgcaccggttaccgcgccgaactcgag
gcgtcgaacgatccgcaggacggcgcacgccttgacaacatcaacgaactcgttgccgtc
gcacgggaattcagtgccgacgccgcgcaggtcgacgccgatgccgacgaccccgaggtc
gaggtggaccgcgagggcgagcccgaacccggttcgctcgcagcgtttctcgagcgggtc
tcactcgtcgccgatgccgatcaggtgcccgacgagggggagggcgtggtcacgatgatg
accctgcacaccgccaagggcctcgagttcccggtcgtcttcgtcacgggttgggaagac
ggtcatttcccgcacatgcgtgcgctcggcgatccggcggagctcagcgaggaacggcgc
ctggcctacgtcgggatcacacgcgccaagcagcgtctgtacctcacccggtcggtcacc
cgcgcctcctgggggcagccggtgtcgaatccggaatcccgtttcctgcaagagatcccg
caacacctggtcgactggcgccgaaccgaacccaagcgctcgatgcgcggcttcagcgga
tcgtcgggcggcgtgttcggccgcgacggggcattctccggttcgggcggttcgtcgatg
ggccgtggccggtcgtcgtactcgtcggatccggcacgtggacgcaacaagcaggttcag
ctcgacatcggcgaccgacacaaccatccgaagtacggcatgggcaaggtcgtggccaag
gagggcagcggcgccaccgaacgcgtcaccatcgactacggcggcagcgcgggacgcgtc
acgcttctcaccgcgggcgggattcccggggacaagctctaa
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