Gordonia hongkongensis: MVF96_09330
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Entry
MVF96_09330 CDS
T08182
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
ghn
Gordonia hongkongensis
Pathway
ghn00300
Lysine biosynthesis
ghn00470
D-Amino acid metabolism
ghn01100
Metabolic pathways
ghn01110
Biosynthesis of secondary metabolites
ghn01120
Microbial metabolism in diverse environments
ghn01230
Biosynthesis of amino acids
Module
ghn_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ghn00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
MVF96_09330 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
MVF96_09330 (lysA)
Enzymes [BR:
ghn01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
MVF96_09330 (lysA)
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
UPG69951
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All DBs
Position
2058710..2060131
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AA seq
473 aa
AA seq
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MNAHPAGPRHAELLAAPHLAERPNDPAVLAAIPAQVWPRNASRDESGELRLAGVPVSQLA
EEFGTPAFVVDEADFRSRCRDMMAAFGPYGRVHYASKAFLSTEIARWVDDEGLSLDVCSG
GELAIALRAGFPPERIALHGNNKSVDELRAAVDAGIGHVVLDSMIEIDRLDAIAGERGVV
ADVLVRVTVGVEAHTHEFISTAHEDQKFGFSLAGGIAMEAIRRVFATDNLRLVGLHSHIG
SQIFDMDGFELAAHRVLGLLRDVVGEFGVEKTAQMSVVDLGGGLGISYLPDERPLPVQKV
AETLAAIVERESAALGLPMPTIAVEPGRAIAGPGTITLYRVGTVKDVALGGGAVRRYVSV
DGGMSDNIRTVLYDAEYDVRLVSRVSEARAVVCRVVGKHCESGDIVIKDCWLPEDLGPGD
LIAVAATGAYCYSMSSRYNMTMRPPVVAVADGNARLLLRRETIDDFLSLEVGL
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgcccaccccgccggcccccggcacgccgaactgctggccgcgccccatctcgcc
gagcgtccgaacgacccggccgtgctcgccgccatccccgcacaggtgtggccacgcaac
gcatcccgcgacgaatcgggcgagctgcggttggccggcgtgccggtgagtcagctcgcc
gaagagttcgggacgccggcgttcgtcgtggacgaggccgacttccggtcgcgctgccgg
gacatgatggcggcgttcggcccgtacgggcgagtgcactatgcgtcgaaggcgttcctg
agcaccgagatcgcgcgctgggtcgacgacgaggggctgtccctggacgtctgcagcggt
ggtgaactcgccatcgcactgcgcgccggtttcccgccggagcgaatcgcattgcacggc
aacaacaagagcgtcgacgagctgcgcgctgcggtcgatgccggaatcgggcacgtcgtc
ctcgactcgatgatcgagatcgatcggctcgacgcgatcgccggcgaacgcggtgtcgtc
gccgacgtgctggtgcgcgtgaccgtcggtgtcgaagcgcacacccacgagttcatctcg
accgcacacgaggaccagaagttcggattctcgctcgccggtgggatcgcgatggaagcc
atccggcgggtcttcgcgaccgacaacctcaggcttgtgggtctgcacagccacatcggg
tcgcagatcttcgacatggacggattcgagctggccgcccaccgggtgctcggactgctc
cgcgacgtcgtcggcgagttcggtgtcgagaagaccgcgcagatgtcggtcgtcgatctc
ggtggcggactggggatctcgtacctccccgacgagcgtccgctgccggtgcagaaggtg
gcggagacgctcgcggcgatcgtcgagcgggagtcggcagcactcgggctgcccatgccg
accatcgccgtcgaaccgggccgcgccatcgccggtcccggcacgatcacgctgtatcgc
gtcggcaccgtgaaggacgtcgcactgggcggcggcgccgtacgacgctacgtctccgtc
gacggcggcatgagcgacaacatccgcaccgttctctacgacgccgaatacgacgtgcgg
ctcgtgtcccgggtgtcggaggcccgtgcggtggtgtgccgggtcgtgggaaagcattgc
gagagcggcgacatcgtgatcaaggactgttggctgccggaggatctcggccccggcgac
ctgatcgcggtggcggcgaccggtgcctactgctactcgatgtcgagccgatacaacatg
accatgagaccgcccgtggtggcggtggccgacgggaacgcccggctgctgctgcgccgg
gagaccatcgacgacttcctcagcctggaggtgggcctgtga
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