Gordonia hongkongensis: MVF96_10575
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Entry
MVF96_10575 CDS
T08182
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ghn
Gordonia hongkongensis
Brite
KEGG Orthology (KO) [BR:
ghn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ghn03016
]
MVF96_10575 (truB)
Enzymes [BR:
ghn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
MVF96_10575 (truB)
Transfer RNA biogenesis [BR:
ghn03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MVF96_10575 (truB)
Prokaryotic type
MVF96_10575 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
PseudoU_synth_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
UPG70163
LinkDB
All DBs
Position
2330952..2331851
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AA seq
299 aa
AA seq
DB search
MADATIENAGLLVVDKPAGMTSHDVVSRCRKIFNTRRVGHAGTLDPMATGVLVVGIERAT
KLLGLLSLTTKSYTATIRLGASTTTDDREGEILDTADASGVLDADIAAAMADLTGDIQQV
PAKVSAIKVDGRRAHALVRTGADFDLAARPVTVSRFELLDARRDAAFVDLDVAVDCSSGT
YIRSLARDLGAALGVGGHLTELRRTAVGPFTLDHARTLDDVRDEPRVSLDIDEAVKISFP
RRDIDDDEAESISQGRWLEPIGRKEIYVVVDPREQAIALIQEKGRRASSVMVVRPATLR
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
gtggccgacgcaaccatcgagaacgccggactgctcgtcgtcgacaagccagccgggatg
accagccacgatgtcgtgtcacgatgccggaagatcttcaacacccgccgcgtggggcac
gccggtaccctcgacccgatggccaccggtgtcctggtcgtcgggatcgagagggccaca
aagcttctcggactcctctcgctgacgacgaagtcgtacacggcgacgatccgactcggc
gcgtccaccacgaccgacgaccgcgaaggcgagatcctcgacacggcagacgcatccggg
gtcctcgacgccgacatcgccgcggccatggccgatctcaccggtgacatccagcaggtc
ccggcgaaggtcagcgcgatcaaggtcgacgggcggcgagcgcacgcactggtgcggacc
ggagccgacttcgacctcgcggcgcgcccggtcaccgtgtcccgcttcgagctgctcgac
gcccggcgcgacgccgcgttcgtcgatctcgacgtggccgttgactgttcgtcgggcacg
tacatccggtcactggcgcgcgacctcggcgccgcgctcggggtcggggggcacctgacc
gaactccggcggacggcggtcggcccgttcaccctcgaccatgcgcgcacactcgacgac
gtccgcgacgagccgcgcgtcagcctcgacatcgacgaggcggtcaagatctcgttcccg
cgccgcgacatcgacgacgacgaggccgagtcgatcagtcaggggcgatggctggagccg
atcggccgcaaggagatctacgtcgtcgtcgatccgagggaacaggcgatcgccctgatc
caggaaaagggtcgccgcgcgagctcggtgatggtggtgcggccggcgaccctgcgctga
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