Gordonia hongkongensis: MVF96_12065
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Entry
MVF96_12065 CDS
T08182
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
ghn
Gordonia hongkongensis
Brite
KEGG Orthology (KO) [BR:
ghn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
ghn03051
]
MVF96_12065 (pafA)
Enzymes [BR:
ghn01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
MVF96_12065 (pafA)
Proteasome [BR:
ghn03051
]
Prokaryotic proteasome
Bacterial regulatory particles
MVF96_12065 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Motif
Other DBs
NCBI-ProteinID:
UPG66292
LinkDB
All DBs
Position
2661013..2662371
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AA seq
452 aa
AA seq
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MQRRIMGIETEFGVTCTFHGHRRLSPDEVARYLFRRVVSWGRSSNVFLQNGARLYLDVGS
HPEYATAECDSLIQLINHDRAGELVLEDLLVDAEQRLADEGIGGDIYLFKNNTDSAGNSY
GCHENYLVVRAGEFSRISDVLLPFLVTRQLICGAGKVLQTPKAATFCLSQRAEHIWEGVS
SATTRSRPIINTRDEPHADAEKYRRLHVIVGDSNMSEMTTLLKVGSAALVLEMIEAGVAF
RDFALDNPIRAIREVSHDPTGRRPVRLAGGRQASALDIQREYHARAVEHLTNRRPDPEMD
MVVDLWGRMLDAVESDDFAKVDTEVDWVIKRKLFQRYQDRYSMELSDPKIAQLDLAFHDI
KRGRGVFDVLMRKGLVARATTDEAIKTAVNEPPQTTRAKLRGDFISAAQKAGRDFTVDWV
HLKLNDQAQRTVLCKDPFRSVDERVDRLIASM
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
gtgcagcgacgaatcatgggcatcgagaccgagttcggtgtcacgtgcaccttccacggc
caccgccgcctgagtccggacgaggtcgcgcggtacctcttccgccgggtcgtgtcgtgg
ggccggtcctcgaacgtcttcctgcagaacggcgctcgcctctatctcgacgtcggatcg
catcccgaatacgccaccgcggagtgcgacagcctcatccagctgatcaaccacgaccgc
gcgggcgaactggttctcgaggacctgctcgtcgatgccgaacaacgcctggccgacgag
ggcatcggcggcgacatctatctgttcaagaacaacaccgactcggccggcaactcctat
ggatgccacgagaattatctcgtcgtgcgggcgggcgagttctcccgcatctccgacgtc
ctgttgccgttcctcgtgacgcgccagctgatctgtggtgcgggcaaggttctgcagacc
cccaaggccgcgaccttctgcctgtcccagcgcgccgagcacatctgggagggcgtctcc
tcggcgaccacccggtcgcgcccgatcatcaacacacgcgacgagccgcatgccgacgcc
gagaagtaccgcaggctgcacgtcatcgtcggcgactcgaacatgtcggagatgaccaca
cttctcaaggtcggttcggcggctctcgtcctggagatgatcgaggccggtgtcgcgttc
cgggacttcgcgctcgacaatccgatccgcgctatccgcgaggtcagccatgacccgacg
gggcgacgcccggtgcgcctcgccggcggtcggcaggccagcgccctcgacatccagcgc
gagtatcacgcacgcgccgtcgagcacctcaccaaccgccgaccagaccccgagatggac
atggtcgtggacctgtggggacggatgctcgacgccgtggagagcgacgacttcgccaag
gtcgacaccgaggtcgactgggtcatcaagcgcaagctgttccagcgctaccaggatcgg
tactcgatggagctctcggatccgaagatcgcgcagctcgacctggcgttccacgacatc
aaacgcggccgcggcgtgttcgacgtcctgatgcgcaaggggctggtcgcccgggcgacc
accgacgaggccatcaagaccgcggtcaacgagccgccgcagaccacccgcgccaagctc
cggggcgacttcatctcggccgcgcagaaagccgggcgtgacttcaccgtcgactgggtt
cacctcaagctcaacgaccaggcccagcggacggtgctgtgcaaggacccgttccgcagt
gtcgacgagcgcgtcgatcgcctcatcgcctcgatgtga
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