Gordonia hongkongensis: MVF96_12985
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Entry
MVF96_12985 CDS
T08182
Name
(GenBank) IS1380 family transposase
Organism
ghn
Gordonia hongkongensis
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Gene cluster
GFIT
Motif
Pfam:
DDE_Tnp_1_4
DDE_Tnp_1
Motif
Other DBs
NCBI-ProteinID:
UPG66445
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Position
2859478..2860872
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AA seq
464 aa
AA seq
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MSKSTSPYPVLSADGTGTGVVSQAGATVLLRTAEKTGLTTDLSDALTPWRKPLATHDPGK
IITDLAVAVAIGGDCLADINQLRADPAVFGQVASDPTVSRLISALAADAPAALTAINSAR
AAARAECWSAAATSAPDHDADTGDPLIVDLDATLVTAHSEKQDAAPTYKRGFGFHPLCAF
VDHGSQGTGEPLAIQLRPGNAGANTAADHITVTAAALEQLPTVQGYRVGKSVLVRTDSAG
GTHEFLGYLTRRRLAYSVGFGLTETIAAATDRISPEAWTPAYDADGVQRDGAWVAELTGL
IDLSGWPQGMRVIVRKERPHPGAQLRFTDRDGLRLTAFATNTVRGQLADLELCHRRRARC
EDRVRTAKDCGLTNLPLHGFDQNRIWCAIVMLACELIAWTQMLAFTDHPARRWEPKRLRH
RVFSIAAKISRHARRTRMKLATHAPHVDLLLDGLARLAALPAPA
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
gtgagtaagtctacgtcgccctatcccgtgctgtctgcagatggcaccggaaccggggta
gtgtcgcaagccggcgccacggtgttgctgcggacagccgagaaaacgggcctgaccacc
gatttatcggacgcgttgacaccgtggcgtaaacccctggcgacccacgatccaggcaag
atcatcacggatctggccgtggcagtcgcgatcggcggtgattgtctggccgacatcaac
caactgcgcgccgaccccgccgtattcggtcaggtcgcctctgaccccacggtgtcacga
ctgatctcggcgttggccgccgacgccccagcggcattgacggccatcaactccgcccgc
gctgctgcccgggcagagtgctggtcagcagccgccacgtccgcccccgatcacgacgcc
gatactggcgatcccctgatcgtcgatctcgacgcaaccttggtgaccgcgcactcggag
aaacaggatgcggcaccaacctacaagcgcgggttcggtttccacccgctgtgtgcgttt
gtcgatcacggtagccagggcactggcgaacccctggccatccaattgcggcccggcaac
gccggcgccaacaccgccgccgaccacatcacggtcaccgccgccgcactcgagcagcta
ccgacggtgcaggggtatcgggtcggcaagtcggtgctggtacgcaccgactcggccggc
ggcacccacgagttcctcggctatctcacccgccggcgcctggcctattcagtgggattc
gggctgaccgagaccatcgcggccgcaaccgaccggatcagtcccgaggcgtggaccccg
gcctacgatgccgacggcgtgcaacgcgacggggcgtgggtggccgagttgaccgggttg
atcgacctatcgggctggccgcaggggatgcgtgtgatcgtccggaaggagaggccgcac
ccgggtgcacaattgcggttcaccgaccgtgatgggttgcggctgaccgcgttcgccacc
aacaccgtccgtggccaactcgctgatctggagctgtgtcaccggcggcgggctcgatgt
gaggaccgggtccgtaccgccaaagactgtggcctgacgaatctcccgctgcacggcttc
gatcagaaccggatctggtgcgcgatcgtgatgctcgcctgcgagttgatcgcctggacg
cagatgctcgcgttcaccgatcaccctgctcgccggtgggaacccaagcgactgcgccac
cgcgtgttctcgatcgcggccaagatcagccgccacgcccggcgaacccgcatgaagctg
gccacccacgctccgcacgtcgatctgctactcgacgggctagcaaggcttgcagcactt
ccagcgccggcctga
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