Gordonia hongkongensis: MVF96_13675
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Entry
MVF96_13675 CDS
T08182
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
ghn
Gordonia hongkongensis
Pathway
ghn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ghn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MVF96_13675 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ghn03400
]
MVF96_13675 (recC)
Enzymes [BR:
ghn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
MVF96_13675 (recC)
DNA repair and recombination proteins [BR:
ghn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MVF96_13675 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
UPG66563
LinkDB
All DBs
Position
complement(2987060..2990518)
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AA seq
1152 aa
AA seq
DB search
MLILHRAERTDTLADALAEVLARPLGDPMRPEIVSVPAAGVERWLAQHLARRLGTGTGED
GIAANIDFTGPSRLADAIVAAVLGDTRLNTSGSLTAPDDPWRAAELTWPVLRVLDDRVDD
PALDVIARHIGAGDTSSPRIGRRYATARHLAELFDRYGRSRPSLIADWAAGHDLDGAGRP
LRDDLAWQPGFWRAVRAEIGRPHPAEDLAAVCDRLRTDPAAGGLPERLSVFGPTRITESF
RQIAAAAAVHHDVHLFVPHPSPRLWADLGALVDPDSGNRVPPRRGECELPELRNPLLAGL
SRDLQELQLRLAPIVDRDLHHVPRESVLGDTALHVVQSGIRDDLAPAPGLTDTSDQTDTS
DPTVSADPSVEVHACHGPERQIEVLRDRLLHLFAADPELQPRDVLIMCPDVETFAPLIRG
AFGQAGLPHPAFDLRVRLADRGIRHVNPILDVIVGVVELAAGRVTAGDVVDLLGAPPVRT
RFAMTDDDLDLIREWLAHSNVRWGIGVAERARYGLERFRQGTFDAGLDRIALGVVAEEAD
DEWLGTALPLAGVESTGIDLVGRFDEFLDRLGRVLAELREAAPAHRWAETLIDAVSSLTA
TEPAEDWQRAQAIRMLSEAFGDTRPVEPEEVLRLADVRDLLSALVAGRPTRSNFRTGELT
VCTMVPMRSVPHRVIVLLGIDAEVFPRVQRIDGDDVLGVDPLVGERNPRDEDRQCFLDAI
CAAQDALLVFYSGADPVSGRRIPPAVVVSELVDTLTGLTGVSPVRRHSLHGFDARNFTPG
GVPGIAGPFSHDASMLRGAEALREPTRRVVVAAAEVLPAPERNPDTEDIDLATLIDFHVD
PIVAFVRQRLGARIPDDDRPHDDQLDVELEPLDKWGIGDRFLSRMLTGVSIGECEAAELR
RGTLPPFAFGTRELRAISRTVTRLYGVVEPLRTGTPTTLDVLVRLPDGRRVHGTVGDVFG
DTGPAALVRPTYSKLKAKQQLSGWITLLAVAAAATQGNAAARSVDSAVLIGRAPRGGGTT
TITLRRPEDPVPLLHDLVRLRDEGLRRPLPLPLEPAYTFVENDGPGRRSTFSLANARRNF
DDRFGAAHDPYVKLAFGGDVLAEIDFDDLLDGATPDHRTVGGVELPMADDEPLFAGLART
VWVPLDQHREGT
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atgctcatcctgcaccgcgccgaacgcaccgacacgctggccgatgcgctggccgaagtc
ctggcgcgtccgctcggcgatccgatgcggccggagatcgtgtcggttcccgcagccggc
gtcgagcggtggctcgcccagcatctggcgcggcggctgggaaccggaaccggcgaggac
ggtatcgccgcgaacatcgacttcaccgggccgtcccgcctggctgacgccatcgtcgcg
gcggtgctcggtgacacgcgtctgaacacctcgggctcgctgacggcgccggacgatccg
tggcgtgcggccgaactgacgtggccggtgctgcgtgtcctcgacgaccgtgtcgacgac
cccgcgctcgacgtgatcgcgcggcacatcggcgcgggcgacacctcctcgccccggatc
gggcgccgctacgccaccgcacgccatctggccgagttgttcgaccggtacgggcggtcg
cgtccgtcgctgatcgctgactgggccgccggccacgatctcgacggtgccggccgcccc
ctgcgggacgacctggcgtggcagcccgggttctggcgtgcggtccgcgccgagatcggc
cggccgcatcccgcggaggatctcgccgcggtctgcgatcggctgcgcaccgaccccgcg
gcggggggattgccggaacgactgtcggtcttcgggccgacgcggatcaccgagtcgttc
cgtcagatcgccgcggccgcagccgtccaccacgatgtccacctgttcgtgccccacccg
agtccgcggctgtgggcggacctcggtgccctcgtcgaccccgactccggcaatagggtc
ccacctcgacgcggggagtgcgagctccccgaactgcgaaaccccctgctcgccggtctc
tcccgtgatctgcaggaactccagttgcggctcgctccgatcgtcgatcgggacctgcac
catgtgccgcgggagtcggtgctgggcgacaccgcgctgcacgtcgtccagtcggggatc
cgcgacgacctggctcccgcgcccggcctcaccgacacgtcggaccagaccgacacgtcg
gacccgaccgtctccgcggacccgtccgtagaggtgcacgcgtgtcacgggcccgagcgg
cagatcgaggtcctgcgggatcggttgctgcatctgttcgccgccgatcccgagctgcag
ccgcgcgatgtcctcatcatgtgcccggacgtcgagaccttcgcacccctgatccgtggc
gcattcggacaagcgggactgccgcatccggcgttcgacctgcgagttcggctcgccgac
cgtggaattcgccatgtgaacccgatcctcgacgtgatcgtcggagtcgtggagctggcc
gcgggccgggtgaccgccggtgacgtcgtcgacctcctcggcgccccgccggtacgaacc
cggttcgcgatgaccgacgacgacctggatctgatccgggaatggctggcgcacagcaac
gtccggtgggggataggcgtcgccgaacgcgcccgctacggtctcgaacggttccgccag
ggcaccttcgacgccggcctggaccgcatcgccctcggcgtcgtcgccgaggaggccgac
gacgaatggctcggtaccgcactgccgctcgccggagtggagagcaccggcatcgatctc
gtcggtaggttcgacgagttcctcgaccgactcggtcgggtgctggccgaactgcgggaa
gccgctcccgcgcaccgatgggcggagacgctcatcgacgccgtctcgtcgctgacggcg
accgagcccgccgaggattggcaacgcgcacaggccatccgaatgctcagcgaggccttc
ggggacacccgaccggtcgagccggaggaggtgctgcgtctggcggacgtgcgggacctc
ctgtcggcgctggtcgccggccggccgacgcgctcgaacttccgcaccggagaactgacg
gtgtgcacgatggtgccgatgcgctcggtgccgcaccgggtgatcgtgctgctcgggatc
gacgccgaggtgttcccgcgtgtccagcgtatcgacggggatgacgtactcggcgtcgat
ccgctggtgggcgaacgcaatccgcgggacgaggaccggcagtgtttcctcgacgcgatc
tgcgccgcgcaagatgccctcctcgtcttctacagtggcgccgaccccgtctccggccgg
cggatcccgcccgctgtggtcgtgagcgaactggtcgacacgctcaccggtctgaccggc
gtgagtcccgttcgccggcattcgctgcacgggttcgacgcgcggaacttcacccccggt
ggcgtgccgggaatcgcggggccgttcagccacgacgcgtcgatgcttcgcggagccgag
gccttacgcgagccgacgcggcgcgtggtggtcgccgctgccgaggtgctgcccgcgccg
gaacggaaccccgacaccgaggacatcgacctcgcgaccctcatcgacttccacgtggac
ccgatcgtggcgttcgtccgccagcgcctcggtgcccgcatccccgacgacgaccggcca
cacgacgaccagctcgatgtcgaactggaaccactggacaagtgggggatcggcgaccga
ttcctctcccggatgctgaccggggtgtccatcggggagtgcgaggcggccgagctccgg
cgcggcacgctgccgccgttcgccttcggcacccgcgagctccgcgcgatctcgcggacg
gtcacgcggctgtacggcgtcgtcgagccgttgcgcacagggactcccacgaccctcgac
gtcctggtccgactacccgacggccgccgggtgcacggaacggtcggtgacgtgttcggc
gacaccgggccggccgcgttggtgcggccgacgtactccaagctcaaggccaaacagcaa
ctcagcggctggataacgcttctcgcggtggccgccgccgcgacccagggcaatgccgcg
gcgcggtcggtggactcggcggtcctgatcgggcgggccccgcgaggcggcgggaccacc
accatcacactccggcgccccgaggatccggttccgttgctccacgacctcgtccggcta
cgtgacgagggtcttcgtcgtccgctgccgctgccgctggaacccgcgtacacgttcgtc
gagaacgacgggcccggccggcgcagcacgttctcgctcgccaacgcccgccggaacttc
gacgacagattcggtgccgcgcacgacccatatgtgaagctcgcattcggcggggacgtg
ctggccgagatcgatttcgacgacctcctcgacggcgcgacacccgaccaccgcaccgtc
ggcggtgtcgaactgcccatggccgacgacgaaccgttgttcgccgggctggcccgaacc
gtgtgggtgccactcgatcagcaccgggagggcacgtga
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