Gordonia hongkongensis: MVF96_17340
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Entry
MVF96_17340 CDS
T08182
Name
(GenBank) ATP-dependent DNA helicase UvrD2
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ghn
Gordonia hongkongensis
Pathway
ghn03420
Nucleotide excision repair
ghn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ghn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MVF96_17340
03430 Mismatch repair
MVF96_17340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ghn03400
]
MVF96_17340
Enzymes [BR:
ghn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MVF96_17340
DNA repair and recombination proteins [BR:
ghn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MVF96_17340
MMR (mismatch excision repair)
Other MMR factors
MVF96_17340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
Viral_helicase1
AAA_30
Motif
Other DBs
NCBI-ProteinID:
UPG67193
LinkDB
All DBs
Position
complement(3795119..3797266)
Genome browser
AA seq
715 aa
AA seq
DB search
MDAVPHPTSAAKPESPRRAAVSASGGAVEGLDPEQSAAVLAPRGPVCVLAGAGTGKTRTV
TRRIAHLVDTGQVNPGQVLAVTFTARAAGEMRTRLRSLGVGGTGGSVAAQTFHAAAMRQL
RYFWPRAFGDARWELLDNKFPLISRAARRSGLDTSTDTLRDLSSEIEWAKASLISPENYV
EAVGRLGRESPAPPPKVAAVYGHYEDAKVSPDGDRLLDFDDMLIYMTQILTVEPGAADEF
RSRYRCFVVDEYQDVTPVQQGLLDAWLGERDDLTVVGDANQTIYTFTGASPNHLLDFSRR
FPEATVVRLERDYRSTPQVVDLANRVIGAARGRIAGTRLQLIGQRPPGPAPQFAEYDDEP
AAATAIAIEIKHLIRSGVAPAEIAILYRVNAQSENYEQALTEVGIPYQVRGGEAFFARTE
VRQAMRQLATVAGREVRPDVELLDVVRAVLGELGLSEEQPSGAQARSRWESLKALVQLTE
DMVAENPELTLPQLSAELAARAEARHPPTVQGVTLSSLHAAKGLEWDAVFLVGLTDGSLP
ISQAIKGSWEEVEEERRLFYVGVTRAREHLHLSWALARNEGGRARRRSRFLADLVPDDSP
ASPIAKERAPRRGPTCRVCGSRLMDSTATLLGRCAGCPSDLDEGLLVSLKEWRRERAQEK
KVPAFVVFSDKTLTAIAEQRPTDTAALVAISGIGAKKVDEYGAEIIELVETAGQK
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
gtggacgccgtgcctcatccgacttctgccgcgaaacccgagtccccgcgtcgtgctgcg
gtgtcggcgagtggtggcgcggtcgagggactcgaccccgagcagagcgccgcagtcctg
gcgccgcgcggaccggtgtgcgtgctggccggggcgggcacgggcaagacccggaccgtc
accaggcgcatcgcccacctcgtcgacaccggccaggtcaatcccggccaggtcctggcg
gtcaccttcaccgcccgcgccgccggcgagatgcgcacccgcctgcgcagtctcggtgtc
ggcggtacggggggcagcgtcgcggcccagaccttccacgcggccgccatgcgtcagctg
cggtacttctggccgcgtgccttcggtgacgcccggtgggagctcctggacaacaagttc
ccgctcatctcgcgggcggctcgccgctccggcctcgacacctcgaccgacacgctgcga
gacctgtcgtcggagatcgagtgggccaaggcctcgctgatctcaccggagaactacgtc
gaggcggtcggccggctcggccgcgagtccccggcaccgccgccgaaggtcgcggccgtg
tacgggcactacgaggacgccaaggtctcgcccgacggggaccggttgctcgatttcgac
gacatgctcatctacatgacccagatcctcaccgtcgaaccgggcgccgcggacgaattc
cgttcgcggtaccggtgtttcgtcgtcgacgagtaccaggacgtgacgccggtgcagcag
ggtctgctggacgcctggctcggggaacgcgacgacctgacggtcgtcggtgacgccaac
cagacgatctacacgttcaccggtgcctcgccgaaccatctcttggatttcagtcgccgg
ttcccggaggccacggtcgtccgtctcgagcgcgactaccggtccaccccgcaggtcgtc
gatctggcgaaccgcgtcatcggcgccgcccgggggcgcatcgcgggaacccgcctgcag
ctcatcggacagcgcccgcccgggccggcgccgcagttcgccgagtacgacgacgagccc
gccgccgcgacggcgatcgccatcgagatcaaacacctcatcagatcgggggtcgcgccc
gccgagatcgcgatcctgtaccgcgtcaacgcacagtccgagaactacgagcaggccctg
accgaggtgggcatcccgtaccaggtgcgcggcggcgaggcgttcttcgcgcgcaccgag
gtccggcaggccatgcggcagctcgcgacggtcgctggccgcgaggtcagacccgacgtg
gagctcctcgacgtcgtacgcgcggtgctgggcgagctgggtctcagcgaggagcagccg
tccggtgcgcaggcgcgcagccggtgggaatcactgaaagcgctggtccagctgaccgag
gacatggtcgccgagaacccggaactgacgctgccgcaactgtcggccgaactcgccgcc
cgcgccgaggcgcgccatcccccgacggtgcagggcgtgacgttgtcgtcgctgcacgcg
gccaagggactcgagtgggatgcggtgttcctcgtcggactcaccgacgggtcgctgccc
atcagccaggcgatcaaggggtcctgggaagaggtcgaggaagagcggcgactgttctat
gtcggagtgacgcgtgcccgcgagcacctgcacctgtcgtgggccctggcccgcaacgag
ggcggccgtgcccggcgtcgctcgcggttcctcgccgacctcgtgcccgacgactcgccc
gcgtcgccgatcgcgaaggagcgcgcgccccgccgcggaccgacctgccgggtctgcggt
tcccggttgatggattcgaccgcgacgctgctcggtcgctgcgccgggtgcccgtcggat
ctggacgaaggactgctggtctcgctcaaggagtggcgtcgcgagcgggcccaggagaaa
aaggtgccggccttcgtcgtcttctccgacaagaccctcaccgcgatcgccgagcaacga
ccgaccgataccgctgcgctggtggcgatctcgggaatcggggcgaagaaggtcgacgag
tacggcgccgagatcatcgaactcgtcgaaaccgcaggtcaaaaatag
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