Gordonia hongkongensis: MVF96_17860
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Entry
MVF96_17860 CDS
T08182
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
ghn
Gordonia hongkongensis
Brite
KEGG Orthology (KO) [BR:
ghn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ghn03016
]
MVF96_17860 (truA)
Enzymes [BR:
ghn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
MVF96_17860 (truA)
Transfer RNA biogenesis [BR:
ghn03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MVF96_17860 (truA)
Prokaryotic type
MVF96_17860 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
UPG67284
LinkDB
All DBs
Position
complement(3909442..3910380)
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AA seq
312 aa
AA seq
DB search
MPRQPEPTSTVRRSSRLSREPQTEPVGADSGAGGFCRLRFDISYDGTDFAGWARQVGQRS
VCEELETRLSTVLRVPVRLTVAGRTDAGVHATGQVAHAEVPKSVLETRSIAGDPATLVGR
LAKMCPDDVRVTAVRVVPDEFDARFSALRRHYRYRLTDARWGAEPVVARTTATWRRPLDV
EALNAASSELLGLNDFAAFCRRREGATTIRELQRFSWRRDAEGVLVGEVSADAFCWSMVR
SLVGAVASVGDGRRDIDWCRGLLDERTRSSQVPVAEARGLCLVGVDYPADDELAARNTVT
RDVRGSTGCCGG
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgccgaggcagccggagccgacgtcgacggtgagaagaagtagtcgactgagtcgagaa
ccgcagaccgaacccgtcggcgccgattccggtgccggcgggttctgtcgtctccgcttc
gacatctcgtacgacggcaccgacttcgccggatgggcacggcaggtcggccagcgcagc
gtgtgcgaggaactcgagaccaggttgtcgacggtcctgcgggtgccggtgcggctgacg
gtggcggggcgcaccgacgccggtgtgcatgccactgggcaggtcgcgcacgccgaggtt
ccgaagtcggtactggagacccgatcgatcgccggtgatcccgcgacgctcgtcgggcgt
ctcgcgaagatgtgtcccgatgacgtccgggtgacggccgtgcgcgttgtcccggacgag
ttcgacgctcggttctcggcgctgcgccggcattaccgctatcggttgaccgatgcacgg
tggggtgccgaaccggtggtcgcgcggacgaccgcgacatggcgtcggccgctcgacgtc
gaagcgttgaacgcggcatcgtcggagttgctcggcctgaacgacttcgcggcgttctgc
cgtcggcgggagggtgcgaccacgatccgggaactgcagcggttctcttggagacgggac
gccgaaggagtcctcgtcggcgaggtgagcgcggacgcgttctgctggtcgatggtgcgg
tcgctggtcggcgcggtcgcgagtgtgggcgacggcaggcgcgacatcgactggtgccgt
gggcttctcgatgagcgaacccgcagcagtcaggtccccgtcgccgaggcccggggtctg
tgcctggtcggcgtcgactatcccgccgacgacgaactcgccgcccgcaacacggtgacc
cgtgacgtgcgcgggtcgaccggttgctgtggtgggtga
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