Grimontia hollisae: AL542_01910
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Entry
AL542_01910 CDS
T04260
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
gho
Grimontia hollisae
Brite
KEGG Orthology (KO) [BR:
gho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gho03400
]
AL542_01910
Enzymes [BR:
gho01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
AL542_01910
DNA repair and recombination proteins [BR:
gho03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
AL542_01910
Prokaryotic type
AL542_01910
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
zf_C2H2_13
Motif
Other DBs
NCBI-ProteinID:
AMG29223
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Position
2:423244..424695
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AA seq
483 aa
AA seq
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MKLVWFRRDLRVKDNVALTEACKSGEPVIAIYYETPVQWKAHALAPMQADLIQRRLVTLR
QELETLNIPLLFRSVDRYKDINQSLAQLCQQYQIADIFCTRDYETDEVDRDNAIAGMLSL
TGTTLHRFDYKCIFAPGMVTNGAGNTYRVFTPFKKAWITQATQLDLSPIGAPSPVKTDAL
TSALLRQPCQIAFRYPQCDSVGWPIDDSAIIQRLRDFCRYRVDHYQATRDFPAIPGTSQL
SPYLAIGAISPRQCLARLLAEVPNCMEKDAGGAHVWLSELIWREFYQHIAAAYIDVSKGK
AFQDWTDNIEWNRDELQFQRWKQGKTGFPIVDAAMRQLNDTGWMHNRLRMIVASFLVKDL
HIDWRWGERYFMSKLIDGDFAANNGGWQWSASTGTDAQPYFRVFNPASQSKKFDPNVRFI
RRWLKELESVPDSALHTPHIWAEKKGIELSYPAPIVDHKTARISAIEMFEMAKNYQSTQR
AEP
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgaagctggtttggttcagaagagatctgagagtaaaagacaatgttgccctgactgaa
gcatgcaaaagcggtgagcccgtcattgcgatttattacgaaacgccagtacagtggaaa
gcccacgctcttgcgcccatgcaggctgatttaatccagcgccgtctggttacactccgg
caggaactggagacgctgaatatcccgttgttgttccgctctgtagacagatacaaagat
attaatcaatctctggcacagctttgccagcagtatcagattgccgatattttttgtacc
cgggattacgaaacggacgaagtggatcgtgacaacgccattgctggcatgttaagcctg
acgggcacaacgctgcaccgttttgattacaaatgcatctttgcccccggtatggtgacc
aacggtgcaggcaatacataccgtgtttttaccccgtttaaaaaagcctggataacacag
gcaacccagctagatctttcacctataggcgcacccagtccggttaaaaccgatgcattg
accagcgcattgctgcgtcagccttgtcagatagcgtttcgttacccgcaatgtgattca
gttggctggccgattgacgacagcgccattatccagcgtttgcgtgatttctgtcgttac
cgggtcgaccattatcaagccacgagggattttcccgctattccaggaacaagtcagctc
tcaccctatctggcgattggtgcaatttctccacgtcaatgtctggcgagactgttagcg
gaagtcccgaattgtatggagaaagacgccggcggtgcccatgtttggcttagtgaattg
atttggcgcgagttctatcagcacattgccgccgcttatatagatgtcagtaaggggaaa
gcattccaggattggacagacaacattgaatggaaccgggatgaattgcagttccagcgt
tggaagcagggtaaaaccggctttcctatcgttgatgcggcaatgcggcagttgaatgac
accgggtggatgcacaaccgcctgcggatgatcgtcgccagctttctggtgaaagatctg
catattgattggcgatggggtgagcgttacttcatgtccaaactgatcgacggcgatttt
gccgccaataatggtggttggcagtggtctgcttccacaggcacagatgcccagccttat
ttccgcgtatttaatccggcgtctcagagtaaaaagtttgatccgaatgtaagattcatc
cgtagatggttgaaagaattggaatctgtacccgattcagcattgcatacaccgcacatt
tgggccgaaaaaaagggaatagaactttcgtacccagccccaattgtggatcacaaaacg
gcaaggatcagcgccatcgaaatgtttgagatggcaaaaaactaccagagtacacaaagg
gctgaaccatga
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