Grimontia hollisae: AL542_05325
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Entry
AL542_05325 CDS
T04260
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
gho
Grimontia hollisae
Pathway
gho02020
Two-component system
gho02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
gho00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AL542_05325
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
AL542_05325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gho03021
]
AL542_05325
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
gho02035
]
AL542_05325
Transcription machinery [BR:
gho03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AL542_05325
Bacterial motility proteins [BR:
gho02035
]
Flagellar system
Flagellar assembly proteins
Stator
AL542_05325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
UPF0122
WH2
Motif
Other DBs
NCBI-ProteinID:
AMG29877
UniProt:
A0A377HM90
LinkDB
All DBs
Position
1:complement(393649..394371)
Genome browser
AA seq
240 aa
AA seq
DB search
MNKALTYSRTGASTETVFEQYATLVKRIAHHLVARLPPNVQVEDLIQAGMVGLLEAQQNY
DASKGASFETYAGIRIRGAMLDDIRKGDWVPRSVHKNNRQISEVIAQLEGELGRDPKDKE
IAKRLGMSLEQYHQAQNDINAGRLIGIVDLGVSEDAFVTESHRDENLPFEEVAGDSFKSH
LANAIRGLPEREALVLSLYYDEELNLKEIGAIIGVSESRVCQIQNQAMQRLRTKLSAWSK
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaagcgctcacctatagcaggacaggcgcttcgacggaaacggtgtttgaacaa
tacgccacactagtgaagcgcatcgcccatcacctggttgcccgcttgccgccgaatgtg
caggttgaagatttgattcaggcaggcatggtgggattactggaggcgcagcaaaactat
gatgcctctaaaggggccagttttgaaacctatgccggcatccgtattcgtggtgccatg
ctggatgatatccggaaaggagactgggtaccacgctctgttcataagaacaatcgccaa
atcagcgaagtgattgcccaattggaaggcgaattagggcgggatccaaaagacaaagaa
attgcgaaacgcctaggtatgagtctggagcagtaccatcaggctcagaatgacattaat
gcaggacgactgattggtatcgttgacctgggtgtttcagaagatgctttcgttacagaa
agtcatcgcgacgaaaaccttccctttgaggaggtagccggggacagctttaaatcgcat
cttgcgaatgccatccgcggccttcctgaaagagaagctttggttctctctctctactat
gacgaggaacttaacctcaaagagataggggccattatcggggtcagcgaatcccgggtt
tgccagattcagaatcaggcaatgcagcggttacggaccaagctttccgcttggtcgaag
taa
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