Grimontia hollisae: AL542_06380
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Entry
AL542_06380 CDS
T04260
Name
(GenBank) molecular chaperone DnaK
KO
K04043
molecular chaperone DnaK
Organism
gho
Grimontia hollisae
Pathway
gho03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gho00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AL542_06380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gho03019
]
AL542_06380
03110 Chaperones and folding catalysts [BR:
gho03110
]
AL542_06380
03029 Mitochondrial biogenesis [BR:
gho03029
]
AL542_06380
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gho04147
]
AL542_06380
Messenger RNA biogenesis [BR:
gho03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
AL542_06380
Chaperones and folding catalysts [BR:
gho03110
]
Heat shock proteins
HSP70 / DNAK
AL542_06380
Mitochondrial biogenesis [BR:
gho03029
]
Mitochondrial protein import machinery
Matrix
MMC/PAM proteins
AL542_06380
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Proteins involved in Fe-S cluster biogenesis
AL542_06380
Exosome [BR:
gho04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
AL542_06380
Exosomal proteins of breast cancer cells
AL542_06380
Exosomal proteins of colorectal cancer cells
AL542_06380
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
RNA_pol_Rpb1_6
Motif
Other DBs
NCBI-ProteinID:
AMG30061
UniProt:
A0A377HKP5
LinkDB
All DBs
Position
1:complement(617307..619223)
Genome browser
AA seq
638 aa
AA seq
DB search
MGKIIGIDLGTTNSCVAVLDGDKPRVIENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVT
NPENTLFAIKRLIGRRFEDEEVQRDIEIMPYKIVKADNGDAWVEAKGQKMAAPQVSAEVL
KKMKKTAEDFLGEEVTGAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYG
LDKQGGDRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDNRMINYL
VDEFKKDQGIDLRKDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKV
TRAKLESLVEDLVQRSLEPLKVALADADLSVNDINDVILVGGQTRMPLVQAKVAEFFGKE
ARKDVNPDEAVAVGAAVQGGVLAGEVKDVLLLDVTPLSLGIETMGGVMTKLIEKNTTIPT
KANQVFSTAEDNQSAVTIHVLQGERKQAMYNKSLGQFNLEGINPAPRGMPQIEVVFDLDA
DGILHVSAKDKQTGKEQKITIQASGGLSDEEIEKMVQEAEANKEADKKFEELATARNQAD
QMIHGTRKQIEEAGDALPADEKEKIEAAINELETARKGEDKAAIDEKVQALIAASQKLME
VAQQQAQAAQAQGAGAEQTKQDDDVVDAEFEEVKDDKK
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgggtaagatcattggtatcgacttgggtactaccaactcatgtgtagcagtactggac
ggtgacaagccacgcgtaatcgaaaacgcggaaggcgatcgcacaacgccatcaatcatc
gcgtacacccaggatggtgaaaccctggtgggtcagccagcaaaacgtcaggcagtgacc
aacccagaaaacacgctgtttgcaatcaaacgactgatcggtcgtcgcttcgaagacgaa
gaagttcagcgtgatatcgaaatcatgccttacaaaatcgttaaggctgacaacggcgac
gcttgggttgaagcaaaaggccagaaaatggcggcgcctcaggtttctgctgaagttctg
aagaaaatgaagaaaactgcggaagacttcctgggtgaggaagtgactggcgcggttatc
actgtacctgcgtacttcaacgacgcacaacgtcaggctaccaaagacgctggccgtatc
gcaggtctggaagttaaacgtattatcaacgaaccaactgcggctgcactggcttacggc
ctggacaagcaaggtggtgaccgcactatcgcggtatacgacctgggtggtggtacgttc
gatatctctatcatcgaaatcgacgaagttgatggcgagaagacgttcgaagttctggca
accaacggtgacactcacctgggtggtgaagacttcgacaaccgcatgatcaactacctg
gttgacgagttcaagaaagaccagggcatcgacctgcgtaaagacccactggcaatgcag
cgtctgaaagaagcggctgagaaagcgaagattgaactgtcttctgcacagcaaactgac
gtaaacctgccatacatcacggcagatgcgacaggtcctaagcatatgaacatcaaagtg
acccgtgcgaaactggagtcactggttgaagatctggttcagcgttcactggagcctctg
aaagtggcactggctgatgcagacctgtctgttaacgacatcaacgacgttatcctggtt
ggtggtcagacccgtatgccactggtacaggcaaaagtggctgagttcttcggtaaggaa
gcacgtaaagacgtgaaccctgacgaagcagtagcagttggtgcagcagttcagggcggt
gtactggcaggtgaagtgaaagacgtactgctgctggacgtaacgcctctgtctctgggt
atcgaaaccatgggcggtgtgatgaccaagctcatcgagaagaacaccactatccctact
aaggcgaaccaagtgttctctactgctgaagacaaccaaagcgcagtaactatccacgta
ctgcaaggtgagcgtaagcaggcgatgtacaacaaatctctgggtcaattcaacctggaa
ggcatcaacccagcgccacgtggcatgccacaaatcgaagttgtgttcgacttggatgct
gatggtattcttcacgtttctgcgaaagacaagcagactggcaaagagcagaagatcact
atccaggcatctggcggtctgagcgacgaagaaatcgagaaaatggtacaggaagcggaa
gcgaacaaagaagccgacaagaagttcgaagaactggcgactgcacgcaaccaagctgac
caaatgatccatggcacccgcaagcaaattgaagaagcaggcgatgcgctgccagctgac
gagaaagagaagatcgaagcggctatcaatgagctggaaacagcacgtaaaggcgaagat
aaagcagcgatcgacgagaaagtgcaagcacttatcgcagcatctcagaagctgatggaa
gtggctcagcagcaagcacaagctgcacaagctcaaggcgccggtgcagaacaaactaag
caagacgacgatgttgttgatgctgagtttgaagaagtaaaagacgacaaaaaataa
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