Grimontia hollisae: AL542_07110
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Entry
AL542_07110 CDS
T04260
Name
(GenBank) adenine DNA glycosylase
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
gho
Grimontia hollisae
Pathway
gho03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gho00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AL542_07110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gho03400
]
AL542_07110
Enzymes [BR:
gho01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
AL542_07110
DNA repair and recombination proteins [BR:
gho03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AL542_07110
Prokaryotic type
AL542_07110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
NUDIX_4
HHH
Whib
EndIII_4Fe-2S
HHH_8
Motif
Other DBs
NCBI-ProteinID:
AMG30183
LinkDB
All DBs
Position
1:768652..769722
Genome browser
AA seq
356 aa
AA seq
DB search
MSQSFSDAILTWYDKYGRKTLPWQQEKTPYKVWLSEIMLQQTQVATVIPYFERFMTRFPT
VVDLAHAELDEVLHLWTGLGYYARARNLHKAAQKIAADYNGEFPTTIEDVMALPGVGRST
AGAVLSLSLGQHHPILDGNVKRTLSRHFAVEGWPGKKPVENRLWELAEENTPAEGVQRYN
QAMMDMGAMICTRSKPKCYLCPVNHSCEANAMSRQSDFPGKKPKKTLPEKETCFVLFQYR
DQIWLEQRPPAGLWGGLWCLPETSEQTAASFVASKLAASSFETPEHLTAFRHTFSHFHLD
IVPIRVKLHHKPDNIGDNGIMEGNRGLWYNLNQPAKVGLAAPVQKLLESLTRELNN
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
gtgagtcagtctttttccgatgccattttgacctggtatgacaaatacggccgtaaaacc
ctgccgtggcaacaagaaaaaacaccgtacaaagtgtggctgtctgaaatcatgttgcaa
cagactcaggtggcaaccgttattccctacttcgaacgctttatgacacgcttccctact
gtggtcgatctcgcccatgcggagcttgatgaagtgctccacctctggacaggactgggt
tattacgcccgagcccgtaacctgcataaagccgcgcagaaaattgcggccgactacaac
ggtgaattccccaccaccattgaagatgtcatggcgctgcctggcgtgggacgctcaacc
gccggcgcggtactttcactctcgctcggccaacaccatcccatccttgatggcaacgtg
aaacgcaccctgtcccgacactttgcggtagagggctggccggggaaaaaaccggtggaa
aaccgcctttgggaactggccgaagaaaacacgcccgccgagggcgtgcaacgctacaac
caagcgatgatggacatgggggcgatgatctgtacccgcagcaaacccaaatgctacctc
tgtcctgtcaaccacagctgcgaagccaatgccatgagtcgccagagcgattttccgggc
aaaaagccaaagaaaaccctgccggaaaaagaaacctgctttgtcctgttccaataccgg
gatcaaatctggctggagcaacggccaccagcaggattatggggtggcctgtggtgcctg
ccggaaacatctgagcaaaccgcagccagttttgttgccagtaaactggctgccagcagc
tttgaaacgccagaacacctaaccgcgtttcgccacaccttcagccactttcaccttgat
atcgtgccgattcgcgtcaaactgcaccataaacccgataacattggggataacgggatc
atggaaggcaaccgcgggctttggtataacttaaaccaaccggcgaaagtcgggctggca
gcaccggtacaaaagctgctggaaagcctgacccgagaactcaataactag
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