Grimontia hollisae: AL542_08030
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Entry
AL542_08030 CDS
T04260
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
gho
Grimontia hollisae
Pathway
gho03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
gho00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AL542_08030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gho03021
]
AL542_08030
03400 DNA repair and recombination proteins [BR:
gho03400
]
AL542_08030
Enzymes [BR:
gho01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AL542_08030
Transcription machinery [BR:
gho03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AL542_08030
DNA repair and recombination proteins [BR:
gho03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AL542_08030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
DUF4843
Motif
Other DBs
NCBI-ProteinID:
AMG30332
UniProt:
A0A377HJV1
LinkDB
All DBs
Position
1:complement(963500..964489)
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AA seq
329 aa
AA seq
DB search
MQGSVTEFLKPRLVDIEQVSSTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSTKEGVQEDILEILLNLKGLAVKVEGKDEVILTLNKSGAGPVVAGDITHDGG
VEIANPEHVICHLTDSNAEISMRIKVERGRGYVPASARIHTEEDERPIGRLLVDATFSPV
DRIAYNVEAARVEQRTDLDKLVIDMETNGTLDPEEAIRRAATILAEQLDAFVDLRDVRVP
EEKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSL
TEIKDVLASRGLSLGMRLENWPPASIAED
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcagggttctgtaacagaatttcttaagccgcgtctcgttgacatcgaacaagttagc
tcgacgcacgcaaaagtaactcttgagccgctagagcgtggctttggtcacaccctaggt
aatgctctacgtcgcatcctactgtcgtctatgcctggttgcgcagtgacagaagtagag
attgacggcgtgttgcacgagtacagcaccaaagagggcgtacaggaggatatcctggaa
atcctgcttaaccttaaaggcctggccgttaaggtagagggtaaagatgaagttatcctt
accctaaataagtctggtgcaggccctgttgttgcaggcgacatcacccatgacggtggt
gttgagattgcgaacccagaacacgtgatctgccatctgacagattcaaatgctgaaatc
agtatgcgaatcaaggtagagcgtggtcgcggctatgtaccagcgtcagcgcgtattcat
actgaagaagatgagcgcccaatcggccgtttgcttgttgatgcaacgttcagtccagta
gaccgtattgcttacaatgttgaagcagcacgtgttgaacaacgtacggacttagacaag
ctggttatcgatatggaaaccaatggtacgcttgatccagaggaagctattcgtcgcgca
gcaacgattcttgctgagcaattggatgcattcgtagatctgcgtgatgtacgagttcct
gaagagaaagaagagaagccagagttcgatccgatcctactgcgtcctgtagacgatctt
gaactaactgttcgctctgctaactgtttgaaagcagaagcgatccactacatcggtgat
ctggtacagcgcactgaggttgagcttcttaaaacgccaaacctcggtaagaagtctttg
actgaaattaaagacgtgctggcttcacgtggtctgtctctgggtatgcgcctggaaaac
tggccgccagcatcaatcgctgaagattaa
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