Grimontia hollisae: AL542_09495
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Entry
AL542_09495 CDS
T04260
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
gho
Grimontia hollisae
Pathway
gho00071
Fatty acid degradation
gho00280
Valine, leucine and isoleucine degradation
gho00310
Lysine degradation
gho00362
Benzoate degradation
gho00380
Tryptophan metabolism
gho00410
beta-Alanine metabolism
gho00640
Propanoate metabolism
gho00650
Butanoate metabolism
gho00907
Pinene, camphor and geraniol degradation
gho00930
Caprolactam degradation
gho01100
Metabolic pathways
gho01110
Biosynthesis of secondary metabolites
gho01120
Microbial metabolism in diverse environments
gho01200
Carbon metabolism
gho01212
Fatty acid metabolism
Module
gho_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
gho00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
AL542_09495 (fadB)
00650 Butanoate metabolism
AL542_09495 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
AL542_09495 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
AL542_09495 (fadB)
00310 Lysine degradation
AL542_09495 (fadB)
00380 Tryptophan metabolism
AL542_09495 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
AL542_09495 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
AL542_09495 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
AL542_09495 (fadB)
00930 Caprolactam degradation
AL542_09495 (fadB)
Enzymes [BR:
gho01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
AL542_09495 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
AL542_09495 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
AL542_09495 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
AL542_09495 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
AMG30581
LinkDB
All DBs
Position
1:1245596..1247761
Genome browser
AA seq
721 aa
AA seq
DB search
MIYQGDTLSVRYLEDGLVELNLDAPGSVNKFDLATLERLNEGLNALSQKSDVKALLLTSA
KPAFVVGADITEFLGLFAKQEEELSQWVTHANDIFNKLEDLPFPTISVISGFALGGGCEC
ILATDFRIADSTARIGLPETKLGIMPGFGGTVRMPRLVGADTAMELITAGKESKADAALK
IGLVDAVTAPDDLRDAAIALARQAIDGKLDWQSRRAQKKAPLQLNKMEATMSFTMAKGMV
AQVAGPHYPAPMTAVVAIEEAARLDRDGALLVENKHFVKLAKNDVTQALVGIFLNDQYLK
SKAKKAAKEGKATERAAVLGAGIMGGGIAYQSASKGVPVLMKDISQASLETGMKEASKLL
NKQLERGRINGLKMADILASITPSLHYAGIEQADVIVEAVVENPKVKAAVLSEVEALLPE
GAVLTSNTSTIPIDLLAKSLKRPENFCGMHFFNPVHRMPLVEVIRGKDTSEETVARVVAY
AAKMGKSPVVVNDCPGFFVNRVLFPYFAGFSMLLRDGADFTKIDKVMEKKFGWPMGPAYL
LDVVGIDTAHHAQAVMAEGFPERMAKSYRDAVDVMFESERFGQKNGVGFYKYSIDRKGKP
KKDVDADVTGLLASVLGSAADYSDEEVINRMMVPMINEVVRCLEEGIIATPQEADMALVY
GLGFPPFRGGVFRYLDTIGLTNYVAIADQLANLGPAYEVPQGLRDKATKGEGYFDAQRQS
A
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgatttaccaaggtgacaccctgtccgtgcgctatctggaagatggcctcgtggaactg
aatctcgatgcccccggctcagttaacaaatttgacctcgcgacactggaaagactcaat
gaggggcttaacgcgctatcacaaaagtctgacgtcaaagccctattgctgacctcagca
aagcctgcctttgtggtgggcgcagacatcactgagttcctcggcctctttgccaagcaa
gaggaagagctctctcagtgggtgacgcacgcgaacgatatcttcaacaagctcgaagac
ctgcctttcccgacgatttcggtgatctccggtttcgcactgggtggcggctgcgaatgt
atccttgccactgatttccgtattgcagattccaccgcccgtattggtttgccagaaacc
aaactcggcatcatgccaggctttggcggtaccgtccgcatgccccgactggtgggtgct
gataccgcgatggagctcatcactgcggggaaagagagcaaagccgatgccgcgctgaaa
atcggtctggtcgatgccgtgacggcacccgacgacctgcgtgatgctgcaattgccctt
gccaggcaagcgattgacggcaagctggactggcaatctcgccgcgcacagaaaaaagcg
ccgctgcaactgaacaagatggaagccaccatgagcttcaccatggccaaaggcatggta
gcgcaagtggcgggtcctcactacccggcacctatgacggccgtggttgcgattgaagaa
gccgcgcgtctggatcgtgacggtgccctgctggtcgaaaacaaacatttcgtcaaactg
gcgaaaaatgatgttacccaggcactggtcgggattttcctcaatgaccagtacctgaaa
tcgaaagccaagaaagcggcgaaagaaggcaaagccactgagcgagcagctgtattgggc
gcaggtatcatgggcggcggtatcgcctaccagtcagccagtaaaggcgtgccagtgttg
atgaaagacatcagtcaggcgtcgctggaaaccggcatgaaagaagcatcgaagcttttg
aataaacaactggaacgtggccgtatcaatggtcttaagatggctgacatcctcgcctct
atcacccctagccttcattacgcaggtatcgagcaggccgacgtcattgttgaagccgtg
gtcgagaacccgaaagtgaaagccgcggtactgagtgaagtggaagccttgctgccggaa
ggtgcggtactgacctccaacacctcaaccattccaatcgatctgttggcgaaatcgctc
aagcgaccagaaaacttctgtggcatgcactttttcaatccggtgcaccgtatgccactg
gtggaagtgatccgcggtaaagatacgtctgaagaaactgtcgcgcgcgtggtagcgtat
gccgccaagatgggcaaaagcccagtagtggtgaacgactgcccagggttcttcgtaaac
cgcgtgctgttcccatactttgccggtttcagcatgctgctgcgtgacggcgctgacttt
acaaaaatcgacaaagtgatggagaagaaattcggctggccaatgggcccggcttacctg
ctggatgtggtgggtattgatactgcgcaccatgcgcaggccgtgatggcggaaggtttc
cctgagcgcatggcgaaaagctaccgcgatgcggtggatgtgatgttcgaatccgagcgc
ttcggtcagaagaatggcgtgggtttctacaaatattcaatcgaccgtaaaggcaagccg
aaaaaagacgtggatgcggatgtaaccggcctgctggcatctgttttaggttctgcagcc
gattacagcgacgaagaggtcatcaaccgcatgatggtgccgatgatcaacgaagtggtg
cgttgtctggaagaaggcatcatcgctacccctcaagaagcagacatggcgctggtttac
ggccttggcttccctccattccggggcggcgtattccgctatctggataccattggactg
acaaactatgttgccatcgctgaccaactggccaatctgggtcctgcctacgaagtgccg
caaggtcttcgcgacaaagctaccaaaggcgaagggtatttcgatgcccaacgacagtct
gcctaa
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