Grimontia hollisae: AL542_11140
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Entry
AL542_11140 CDS
T04260
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
gho
Grimontia hollisae
Pathway
gho03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
gho00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
AL542_11140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gho03019
]
AL542_11140
03009 Ribosome biogenesis [BR:
gho03009
]
AL542_11140
Messenger RNA biogenesis [BR:
gho03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AL542_11140
Ribosome biogenesis [BR:
gho03009
]
Eukaryotic type
Pre-60S particles
RNases
AL542_11140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AMG30860
UniProt:
A0A377HJY6
LinkDB
All DBs
Position
1:1568660..1569205
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AA seq
181 aa
AA seq
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MSFSDKNLIWIDLEMTGLDPEVHKVIEIATIVTDAELKVLAEGPVLAIHQSDEELAKMDE
WCTKTHTRSGLVERVKESTINEAQAVKETIAFLQEWVPAGVSPICGNSVGQDRRFLYKHM
PDLERFFHYRTVDVSTIKELVRRWQPDVLSGFKKQGAHLALDDIRESIEELRYYRSKIFT
I
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcagcgataagaatttaatctggattgatcttgaaatgacagggttagacccg
gaagtgcataaagtcattgagatcgcgaccatagtgacagatgctgaactgaaggtgttg
gctgaagggcctgtcctggccattcaccagtcagacgaagaactggcgaaaatggatgag
tggtgcacgaagacccacacccgcagcgggctggtggagcgtgtgaaagaaagtaccatt
aacgaagcgcaagcggtcaaagagacgatcgcatttttgcaagagtgggtacctgcgggt
gtatcaccgatctgcggcaacagtgtcgggcaggatcgtcgattcctgtacaaacatatg
cctgatctggagcgttttttccattaccgcacggtggatgtcagcacgatcaaagagttg
gttcgccgttggcagcctgatgttctgtcagggttcaaaaaacaaggggcgcatttggcg
ttggatgatatccgggagtcaattgaagaactgcgctattaccggagtaagatcttcacg
atctga
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