Grimontia hollisae: AL542_12415
Help
Entry
AL542_12415 CDS
T04260
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
gho
Grimontia hollisae
Pathway
gho00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
gho00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
AL542_12415 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
gho01007
]
AL542_12415 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gho03016
]
AL542_12415 (lysS)
Enzymes [BR:
gho01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
AL542_12415 (lysS)
Amino acid related enzymes [BR:
gho01007
]
Aminoacyl-tRNA synthetase
Class II (A)
AL542_12415 (lysS)
Transfer RNA biogenesis [BR:
gho03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
AL542_12415 (lysS)
Prokaryotic type
Other AARSs
AL542_12415 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
AMG31076
UniProt:
A0A377HQ48
LinkDB
All DBs
Position
1:1868628..1870142
Genome browser
AA seq
504 aa
AA seq
DB search
MTDQLQDENKLIAERRAKLNHIRQRCKANGHPNDFRREHKAADLQAEFGDKSKEELEALD
HKVSIAGRIMAKRGPFLALQDVSGRIQAYASKDVQKELKEQYQGLDIGDIIGVKGALHKS
GKGDLYVNMEEYQLLTKALRPLPEKFHGLTDQELRYRQRYVDLIVNEDSRNTFKVRSKLI
SAIRRYMESKDFMEVETPMMQVIPGGAAARPFITHHNALDQQMFLRIAPELYLKRLVVGG
FERVFEINRNFRNEGLSPRHNPEFTMIEFYMAYADYNDLIDLTEDMLRTVALEVLGQTSM
PYGEHTVDFGGKYARMTMLEAIKHYNPDHADIQALTEEDVQDRDKLVAIAESLKIYVEKF
WTCGQLLEEIFGETAEPKLIQPTFITGYPADVSPLARRSDDNPFFTDRFEFFIGGREVAN
GFSELNDAEDQDARFKAQVDAKDAGDDEAMFYDADYITALEHGLPPTAGQGIGIDRLAML
FTNTHTIRDVILFPAMRPQNQKKD
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgactgaccagttacaagacgaaaacaagctgatcgcggagcgtcgtgcaaaactgaac
catattcgtcaacgctgtaaagcaaacggccacccgaatgatttccgccgtgagcacaaa
gcggctgatcttcaggctgagtttggcgacaagagcaaggaagagctggaagctctggat
cataaagtcagcattgctggccgtatcatggcaaaacgtggtccattccttgcgctacaa
gacgtgagtggccgcattcaggcgtatgcatcaaaagatgtacaaaaagagctgaaagag
caataccagggtctggatattggtgacatcatcggggtcaaaggcgcactgcacaaatca
ggcaaaggtgatctgtatgtcaacatggaagagtaccagctgctgaccaaagcactgcgt
ccgctgccagaaaaattccatggcctgactgatcaggagctgcgctaccgtcagcgctat
gttgatctcatcgtgaatgaagattctcgtaatacgttcaaagtgcgctccaagcttatt
tctgctatccgccgttacatggagtctaaagacttcatggaagtggaaacgccaatgatg
caggtgatcccaggaggtgcggcggcacgtccattcattacccaccacaacgcgctggat
caacaaatgttcttgcgtattgcgccagagctgtatctgaaacgtctggtggtcggcggc
tttgaacgcgtgtttgaaattaaccgtaacttccgcaacgaaggtctgtctccgcgtcac
aacccggaattcactatgattgagttctatatggcgtacgcggattacaacgacctgatt
gacctgaccgaagacatgctgcgcactgtggcactggaagtactgggacagacgtcaatg
ccttacggtgagcatacagtggattttggtggcaaatacgcgcgcatgaccatgctggaa
gccatcaagcattacaatcctgatcatgccgatattcaggcgttgacggaagaagacgtg
caggatcgcgataagctggtggctattgcggagtcactgaaaatctacgttgagaaattc
tggacctgtggccagctgttagaagagatcttcggtgaaactgcagaaccgaaactgatc
cagccaaccttcatcacgggctacccggcagatgtctcgccgctggcacgccgtagcgat
gacaacccgttctttactgaccgctttgagttcttcattggtggccgtgaagtggcaaac
ggcttctcggagttgaacgatgcggaagatcaggatgcacgctttaaagcgcaggtagac
gcgaaagacgcgggtgacgatgaagccatgttctacgatgctgactacatcactgcactg
gagcacggcctgccaccgacagcagggcagggtattggtatcgatcgtctggctatgttg
ttcaccaacacccacacgattcgtgacgtgatcctgttcccggcaatgcgtccacaaaac
cagaagaaagactga
DBGET
integrated database retrieval system
