Grimontia hollisae: AL542_12545
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Entry
AL542_12545 CDS
T04260
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
gho
Grimontia hollisae
Pathway
gho00220
Arginine biosynthesis
gho00240
Pyrimidine metabolism
gho00250
Alanine, aspartate and glutamate metabolism
gho01100
Metabolic pathways
gho01110
Biosynthesis of secondary metabolites
gho01240
Biosynthesis of cofactors
Module
gho_M00051
De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP
Brite
KEGG Orthology (KO) [BR:
gho00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
AL542_12545 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
AL542_12545 (carB)
00220 Arginine biosynthesis
AL542_12545 (carB)
Enzymes [BR:
gho01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
AL542_12545 (carB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
ATP-grasp_3
ATP-grasp
Dala_Dala_lig_C
ATP-grasp_4
ATPgrasp_Ter
CoA_binding_2
DUF6115
Motif
Other DBs
NCBI-ProteinID:
AMG31097
UniProt:
A0A377HQ79
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All DBs
Position
1:1897553..1900786
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AA seq
1077 aa
AA seq
DB search
MPKRTDIQSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEM
ADATYIEPIQWEVVRNIIAKERPDAVLPTMGGQTALNCALDLEKHGVLAEFGVEMIGATA
DAIDKAEDRSRFDKAMKSIGLECPRAGTAKSMEEAYNVLDMVGFPCIIRPSFTMGGTGGG
IAYNKEEFDEICRRGLDLSPTNELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENVDAM
GIHTGDSITVAPAQTLTDKEYQLMRNASLAVLREIGVETGGSNVQFGINPKDGRMVIIEM
NPRVSRSSALASKATGFPIAKVAAKLAVGFTLDELMNDITGGATPASFEPTIDYVVTKIP
RFNFEKFAGANDRLTTQMKSVGEVMAIGRNQQESLQKALRGLEVGATGFDEMVDLDAPDA
LTKIRHELKDAGAERIWYVADAFRAGMSVDGVFKLTNIDRWFLVQIEEIVKLEAEVKEGG
FAGLNAKVLRKLKRKGFSDARLSKLLGVGEGEIRKLRDQFDIHPVYKRVDTCAAEFSSDT
AYMYSTYDEECEANPSDKEKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNC
NPETVSTDYDTSDRLYFEPVTLEDVLAIARVEKPKGVIVQYGGQTPLKLARALEAAGVPI
IGTSPDAIDRAEDRERFQAAVERLGLKQPANATVTALEQAVEKAREIGYPLVVRPSYVLG
GRAMEIVYDESDLRRYFNEAVSVSNESPVLLDRFLDDATEVDVDAICDGERVVIGGIMEH
IEQAGVHSGDSACSLPAYTLSQDIQDEMRRQVEKLAFELGVRGLMNTQFAVKDGEVYLIE
VNPRAARTVPFVSKATGAPLAKIAARVMAGQSLESQGFTQEIIPPYYSVKEVVLPFNKFP
GVDPLLGPEMRSTGEVMGVGDTFAEAFAKADLGCGKTYTEQGRALLSVRNNDKQRVVDLA
AKLIKLGFELDATHGTAVVLGEAGINPRLVNKVHEGRPHILDRIKNGEYSYIINTTEGRQ
AIEDSKVLRRGALAEKVNYTTTLNAAFATCMAHAAADLSKVNSVQELHARVAKKYGS
NT seq
3234 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaacgtacagatatccaaagtattcttatccttggcgcaggcccgattgttatc
ggtcaggcgtgtgagttcgactattcaggtgcacaagcgtgtaaagcgctgcgtgaagaa
ggctaccgtgtcattctggtgaactctaaccctgcaaccatcatgaccgacccggaaatg
gctgatgcgacctacatcgagcctatccagtgggaagtggtccgcaacattatcgccaaa
gaacgtccggatgcagtgctgccgaccatggggggccagacggcactgaactgtgcattg
gatctggaaaaacacggcgtactggctgaattcggcgtggaaatgattggtgcaaccgcg
gatgcgattgacaaagcggaggaccgttcacgttttgataaagccatgaagtctatcggc
ctggaatgtccccgtgctggtacggcaaaaagcatggaagaggcatataacgtcctcgat
atggtcggcttcccttgtattatccgtccttctttcaccatgggaggcaccggtggcggt
atcgcctataacaaagaagagtttgatgaaatctgccgccgcggactggatctttcaccg
accaacgaactgctgattgacgaatccctgatcggttggaaagagtacgaaatggaagtg
gttcgtgataagaacgacaactgcattatcgtctgctctatcgaaaacgtcgatgccatg
ggcatccacaccggtgactccatcaccgttgcgccagcgcaaaccctgactgacaaagaa
taccaactgatgcgtaatgcctcgctggcagtgctgcgtgaaatcggcgtagaaaccggt
ggctctaacgtgcaattcggtatcaacccgaaagatggccgtatggttatcatcgaaatg
aacccgcgcgtgtcgcgctcttctgccttggcgtcgaaagcaaccggcttcccgatcgca
aaagtggcagcaaaactggcagtcggtttcacccttgatgagctgatgaacgacatcacg
ggcggcgcaacgccagcgtcgtttgaaccgactatcgattacgtggtgaccaaaatccca
cgctttaacttcgaaaaatttgctggcgctaatgatcgactgaccacccagatgaaatct
gtgggtgaggtgatggcgattggccgtaaccagcaggaatcgctgcaaaaagccttgcgt
ggtctcgaagtgggtgcgaccggtttcgacgaaatggtggatctggatgcgccggatgca
ctgaccaaaatccgccatgagctgaaagatgccggtgcagagcgtatctggtatgtcgcg
gacgcattccgcgcaggcatgtctgtggatggtgtgttcaagctgaccaacatcgaccgc
tggttcttggttcaaatcgaagagattgtgaagctggaagccgaagtcaaagaaggcggc
tttgcaggcttaaatgccaaggtactgcgcaaactcaagcgtaaaggtttctctgatgca
cgcctgagcaagttgttgggtgtgggcgagggagaaatccgcaaactgcgcgaccagttc
gatatccaccctgtctacaagcgtgtggatacctgtgcggcagaattctcctctgatacc
gcgtacatgtactctacgtatgatgaagagtgtgaagcgaacccgtcagacaaagagaag
atcatggtgctgggtggcggtccaaaccgtattggtcagggtatcgagtttgactactgc
tgtgttcatgcatcgctggcgctgcgtgaagacggctatgaaaccatcatggttaactgt
aaccctgaaacggtttccacagactacgacacctctgaccgtctgtactttgaaccagtc
acgttggaagatgtactggctatcgcacgggttgaaaagcccaaaggggttattgtccag
tatggcggccagacgccactgaaactggcacgagcactggaagcggccggtgtgcctatc
attggtaccagcccggatgcgattgaccgcgcggaagaccgtgagcgctttcaggccgct
gttgaacgtctgggcctgaaacaacccgcaaacgccacagtaacagcgctggaacaggca
gtagaaaaagcacgcgaaattggctatccactggtggtgcgcccgtcctatgtgctgggt
ggccgcgccatggaaatcgtctacgacgaaagcgacctgcgccgctatttcaatgaggcg
gtgagtgtttcgaacgaatccccggttttgctggatcgcttcctggatgacgcaacggaa
gttgatgttgatgcgatttgcgacggcgagcgtgtggtgattggcggtatcatggagcac
atcgagcaagcgggtgttcactccggtgactcggcatgttccctgcctgcgtacaccctg
agtcaggacattcaggacgaaatgcgccgtcaggttgagaagctggcttttgagcttggc
gtccgtggcctgatgaatacccagtttgccgtgaaagacggtgaagtgtacctgattgag
gtcaacccacgtgcagcgcgtactgtacctttcgtgtcgaaagcgacaggcgcaccactg
gcgaaaatcgcagcacgcgtaatggcaggtcagtctctggagtcacaaggtttcacccag
gaaatcattcctccttactactctgtgaaagaagtggtgctgccatttaacaagtttccg
ggcgttgacccactgcttggccctgaaatgcgttcaactggcgaagtgatgggtgtgggc
gatacctttgcagaagcgtttgcaaaagccgatctgggctgtggtaaaacctacaccgag
caaggtcgtgcactgttgtctgtgcgtaacaacgacaagcaacgtgtggtcgatctcgca
gccaagcttatcaagctcggctttgagctggatgcaactcacggtacggcggtagtgctg
ggtgaagcaggcattaacccgcgtctagtgaacaaggtgcatgaaggtcgtccgcatatt
cttgaccgtattaagaatggcgaatacagctacatcatcaacaccacggaaggccgtcag
gcgattgaggactcaaaagtcctgcgccgtggtgcactggcagagaaggtgaattacacc
accacgctgaacgcggcatttgcaacctgtatggcgcacgcggccgcagatctgtcgaaa
gtaaactccgttcaggagctgcacgcccgcgtggcaaagaaatacggtagctaa
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