Grimontia hollisae: AL542_13775
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Entry
AL542_13775 CDS
T04260
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase accessory protein YcaO
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
gho
Grimontia hollisae
Brite
KEGG Orthology (KO) [BR:
gho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gho03009
]
AL542_13775
Ribosome biogenesis [BR:
gho03009
]
Prokaryotic type
ribosomal protein modification factors
AL542_13775
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Ortholog
Paralog
GFIT
Motif
Pfam:
YcaO
YcaO_C
TPR_MalT
DUF1529
Motif
Other DBs
NCBI-ProteinID:
AMG31310
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Position
1:complement(2173493..2175247)
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AA seq
584 aa
AA seq
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MKTYIPGKDAALEESINHFETKLKAAGFNVQPISWLNPVPNVWSVHIRDVDAPMNFTNGK
GASQKAALASALGEYFERLSCNYFYADFYLGQEMAESPFVHYPDEKWFPLTDDDTLPEGL
LDDRMRAFYDQDETLMASDLIDLQSGNETRGICALPFVRQKDQQTVYIPMNIIGNLYVSN
GMSAGNTVTEARSQALSEVFERAIKNRIIAGRISMPEIPQEVIARYPSIKASIDALIAEG
FPITVYDASMGGQYPVVCVTLFNPHNGTCFTSWGAHPRFQVALERTVTELLQGRSLKDLD
VFEAPSFHDEEVADHHNLETHFIDSSGTVSWDMFKATPDYAFTEWNFEGTSEEEVAWLLG
KLHAEDADAYIADYQHLGVNCCRVIVPGWSEIYPPEEVQLCNNNRGTELRNAMAMLLATG
FSDEAVESLFDVLEISDFDDSYMVCELMGILPDADTAWKTLTIGELKCLLALAMGDLETA
QDLATWSLEYNATIYSPARTLFMRCLIASLELAQDNNRDAAEYRRAFGFVYGETITDAVW
ASICGDIRFYGLELENADLTAFSAHQKLLASYEKLQRAKAHPVT
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacctatatccccggtaaagacgctgcccttgaagagtctatcaaccattttgaa
accaaactgaaggcagctggctttaacgttcaacccatttcctggttaaaccctgtcccc
aacgtctggtctgtacacatccgtgatgtggatgcccccatgaactttaccaatggtaaa
ggggcaagccaaaaagccgcgttggcatctgcactgggtgaatattttgagcgcctctcc
tgcaactatttctatgctgacttctacctcggtcaagaaatggcagagtcgccctttgtg
cattaccctgatgaaaaatggtttccgctcaccgatgacgacaccctgcccgaaggcttg
ctcgatgacaggatgcgtgcgttttacgatcaggatgagaccctgatggcgagcgatctg
attgatctgcagtcgggtaatgaaacacgggggatttgcgccctgccatttgtccgccaa
aaagatcaacagaccgtttatataccgatgaatattatcggcaacctgtatgtctctaat
gggatgtcagcaggcaacacagtgacggaagcacgtagccaggcgctgtctgaggtcttt
gagcgcgccataaaaaaccgtatcatcgccgggcgcatcagcatgccggaaattccgcag
gaggtgatcgcccgttatcccagcatcaaagcatcaatagatgctctgatagcagaaggc
ttccctatcacggtttacgatgcctcgatgggcggtcagtatcctgtggtatgtgtcacc
ctgtttaacccccacaacggtacctgttttacctcttggggcgcacatccacgctttcag
gttgcgcttgaacgcacagtgactgaactgctccaggggcgtagcctgaaagatctcgat
gtgtttgaagcgccgtcgttccatgatgaagaggtggctgaccaccataatctggaaacc
catttcattgactcttccggtacagtttcctgggatatgttcaaagcaacaccggactac
gcatttaccgagtggaactttgaaggcacctcagaagaagaggtagcatggcttttaggc
aaactgcacgctgaagatgctgatgcctacatcgccgattaccagcaccttggcgtgaat
tgctgccgtgtgattgtgccaggctggtcagaaatctacccaccggaagaagtgcaactt
tgtaacaacaaccgtggcacagaactgcgtaacgccatggcgatgctactggccacagga
ttcagcgatgaagccgttgagtccctgtttgatgtgctggaaatatcagacttcgatgac
agctacatggtatgtgaactgatgggtattttgccggatgccgacaccgcgtggaaaaca
ctcactatcggcgagctgaaatgtctgctggcactggcgatgggcgatctggaaaccgct
caggatctggcaacctggagtctggaatacaacgccaccatttacagcccagcccgtacc
ctgtttatgcgttgcctgattgcgagccttgaactggcccaggacaacaaccgcgatgcg
gctgaataccgtcgtgcctttggttttgtatatggcgagacgatcactgacgcagtttgg
gcatccatatgtggcgatatccgtttctatggcctggagctggaaaatgcggatttgacg
gcattcagtgcccatcaaaaactgttggcctcctatgaaaagctgcaacgagcgaaagct
cacccagtcacctga
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