Grimontia hollisae: AL542_14730
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Entry
AL542_14730 CDS
T04260
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
gho
Grimontia hollisae
Brite
KEGG Orthology (KO) [BR:
gho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gho03032
]
AL542_14730
03400 DNA repair and recombination proteins [BR:
gho03400
]
AL542_14730
Enzymes [BR:
gho01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
AL542_14730
DNA replication proteins [BR:
gho03032
]
Prokaryotic type
DNA Topoisomerases
AL542_14730
DNA repair and recombination proteins [BR:
gho03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AL542_14730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Ins134_P3_kin_N
Motif
Other DBs
NCBI-ProteinID:
AMG31469
LinkDB
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Position
1:2386710..2389337
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AA seq
875 aa
AA seq
DB search
MSDLAKEITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN
KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM
RYTEVRMAKIAHELLADLDKETVDYVPNYDGTEQIPEVMPTRIPNLLVNGASGIAVGMAT
NIPPHNLTEVVNGCLAYIENEDITIEELMTHIPGPDFPTAAMINGRKGIEDAYRTGRGKI
YLRSKADIETDKNGKETIVVTEIPYQVNKARLIEKIAELVKDKKIEGISALRDESDKDGM
RIVIECKRDAVAEVILNNLYAQTQLQTSFGINMVALDNNQPRLFNLKDMLKCFVNHRREV
VTRRTIFELRKARDRAHILEGLAIALANIDEIIELIRNAQTPAVAREALQNRGWDLGTVA
VMLEATGVDAARPEWLEDEFGVRDGKYYLTEQQAQAILDLRLHKLTGLEHEKILDEYKEL
LTLIGELMFILSSPERLMEVIREELEAVRDGFGDERRTEITAASADIDIEDLINQEDVVV
TLSHEGYVKYQPLTDYEAQRRGGKGKSATRMKEEDFIERLLVANTHDTILCFSTRGRMYW
LKVYQLPLASRTARGKPIVNLLPLEQDERITAILPVKEYEDDKFVFMATSDGTVKKTPLT
DFSRPRSAGIIAVNLREGDSLIGVDITWGDNDVMLFSKSGKVVRFHESQVRAMGRTAAGV
RGIKLAEGDKVVSLIVPHNEGDVLTVTENGYGKRTELCEYPAKSRATQGVVSIKVSERNG
CVVGAVQVDTGYEFMMITNGGTLVRTRVAEVSQVGRNTQGVRLIRTSEGERVVGLQRIEE
PEEELLPSEEGGELATQTVSEVPAEDAANDEASDE
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatcttgctaaagagatcacgcctgtcaacattgaagaggagctgaaaagctca
tacctcgactacgcgatgtccgttatcgtgggtcgtgctcttcccgatgtgcgtgatggt
ctgaagcctgtacaccgccgtgttcttttcgcgatgaatgtactgggcaatgactggaac
aaagcatataaaaaatctgcacgtgttgtcggcgatgtgatcggtaaataccacccacac
ggtgacagcgctgtttacgacaccattgttcgtatggctcagccgttctcactgcgttac
atgctggtcgatggccagggtaacttcggttcgattgacggtgactccgcagcggcaatg
cgttacaccgaagttcgtatggcgaaaattgcccacgaactgttggcggatctggacaaa
gaaacggtcgattacgttcctaactatgacggtacagagcagatcccagaggtgatgcca
acccgaatccccaacctgttggttaacggtgcatccggtatcgctgtaggtatggcgacc
aatattcctccacacaacttgaccgaagtggtgaatggctgtctggcttatatcgagaat
gaagacatcacgatcgaagagctaatgacccacatccctggtccggacttcccgactgcg
gcgatgatcaacggccgcaaaggtattgaagatgcctaccgtaccggtcgaggtaagatt
tacctgcgttctaaagcggatattgaaaccgacaagaatggcaaagaaaccattgttgtt
actgagatcccttatcaggttaacaaagcccgcttgatcgaaaagatcgccgagctggtg
aaagataagaagattgaaggcatcagtgcattgcgtgacgagtcagacaaagacggtatg
cgcattgtcattgaatgtaagcgtgacgcggtggcagaagttattctcaacaacctgtac
gctcagactcagctgcaaacttctttcggcatcaacatggttgcgttggataacaaccag
ccacgcctgttcaacctgaaagacatgctgaagtgcttcgtgaaccaccgccgtgaagtg
gtgacacgtcgtactattttcgaactgcgtaaagcccgtgaccgtgcccatatcctggaa
ggtctggcaattgcgctggcaaatatcgatgaaattatcgagcttatccgtaatgcccaa
actccggcggttgcacgtgaagcgctgcaaaaccgtggttgggatctgggtactgtggct
gtcatgctggaagcgaccggcgttgatgcagcacgccctgagtggttggaagatgagttc
ggtgtccgtgatggtaagtactacctgaccgaacaacaggcccaggctatcctggatctg
cgtcttcataaactgaccggccttgagcacgagaaaattctggatgaatacaaagaactg
ctgacactgatcggcgagttgatgttcatcctgtccagccctgagcgtttgatggaagtg
atccgtgaagagctggaagcggtgcgtgacgggtttggtgatgagcgccgtactgaaatt
accgcagcaagcgctgacatcgatatcgaagatctgatcaaccaggaagatgtggttgtt
accctgtcgcacgaaggttacgtgaagtatcaacctcttaccgattacgaagcgcagcgc
cgtggtggtaaaggtaagtcagcgacccgcatgaaggaagaagattttattgagcgtctt
ctggtcgcgaacactcacgatactattctgtgcttctcaacccgtggccgtatgtactgg
ctgaaggtttaccagttgccgctggcatcacgtactgcacgtggtaaacctatcgttaac
ctgttgccgctggaacaggatgagcgcatcaccgcgatccttccagtgaaagaatacgaa
gatgacaagtttgtcttcatggcaaccagcgacggcactgtgaagaagacccctctgacc
gacttcagccgccctcgcagtgccggtatcattgccgtcaacctgcgtgagggggattca
ttgatcggcgttgatattacctggggtgataacgacgtcatgttgttctcgaaatcaggt
aaagtggttcgcttccatgaaagccaggtccgtgcaatgggccggacggcggcaggtgtt
cgtggtatcaaactggccgaaggtgacaaagttgtttccctgattgttcctcacaacgaa
ggtgatgtgctgactgtgactgagaacggttacggtaagcgtactgagctttgtgagtac
ccggcgaagagccgtgcaactcagggtgttgtttctatcaaagtctctgagcgcaatggc
tgtgttgttggtgcggtacaggtagacaccggttacgagtttatgatgatcaccaatggc
ggtacgctggtgcgcacacgtgtagcagaagttagccaggtgggccgtaacacccagggt
gttcgattgattcgtacctcagaaggggagcgggttgttggtcttcaacgtattgaagag
ccagaagaagagctgcttccatcagaggaaggcggcgaactggcaacccagaccgtgtct
gaggtgcctgcagaagatgctgcaaatgatgaagccagtgacgagtaa
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