Grimontia hollisae: AL542_14760
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Entry
AL542_14760 CDS
T04260
Symbol
ihfB
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
gho
Grimontia hollisae
Brite
KEGG Orthology (KO) [BR:
gho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gho03032
]
AL542_14760 (ihfB)
03036 Chromosome and associated proteins [BR:
gho03036
]
AL542_14760 (ihfB)
03400 DNA repair and recombination proteins [BR:
gho03400
]
AL542_14760 (ihfB)
DNA replication proteins [BR:
gho03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
AL542_14760 (ihfB)
Chromosome and associated proteins [BR:
gho03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
AL542_14760 (ihfB)
DNA repair and recombination proteins [BR:
gho03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
AL542_14760 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
HAAS
HU-DNA_bdg
Glycos_trans_3N
Motif
Other DBs
NCBI-ProteinID:
AMG31475
UniProt:
A0A377HPA8
LinkDB
All DBs
Position
1:2396704..2396985
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AA seq
93 aa
AA seq
DB search
MTKSELIERLCSQQTHLSAKQVEDAIKEILEHMATTLEEGDRIEIRGFGSFSLHYRAPRV
GRNPKTGDKVELDGKYVPHFKPGKELRDRVNIR
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagtctgagttgatcgaaaggctgtgtagtcaacaaacccatctttctgccaaa
caggtagaagatgccatcaaggaaatccttgagcacatggccactacactcgaagaaggt
gaccgaatcgagattcgtggttttggtagtttctctttgcattatcgcgctcctcgtgtt
ggacgaaatccaaagactggtgacaaagttgagctcgacggcaagtacgttcctcacttt
aaaccaggcaaggagcttcgcgaccgggtcaacattcgctga
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