Grimontia hollisae: AL542_16045
Help
Entry
AL542_16045 CDS
T04260
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
gho
Grimontia hollisae
Pathway
gho03030
DNA replication
gho03430
Mismatch repair
gho03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gho00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AL542_16045
03430 Mismatch repair
AL542_16045
03440 Homologous recombination
AL542_16045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gho03032
]
AL542_16045
03400 DNA repair and recombination proteins [BR:
gho03400
]
AL542_16045
Enzymes [BR:
gho01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AL542_16045
DNA replication proteins [BR:
gho03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AL542_16045
DNA repair and recombination proteins [BR:
gho03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AL542_16045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DEDDh_C
DUF4246
Reovirus_cap
Motif
Other DBs
NCBI-ProteinID:
AMG31697
UniProt:
A0A377HN52
LinkDB
All DBs
Position
1:2675510..2676229
Genome browser
AA seq
239 aa
AA seq
DB search
MFKRNSWKAEGLINERVCAQHHYLTREQWPSSLSALIDMPLPSASSDLKSLDTLVLDFET
SGLDPEQDKVLSMGWVEIRQSQIRLSSARHILVNQPVLNGYESARIHHLRPETLRNCGVS
EHHAFSQLFDVMKGKVIVAHGSVIEKRFLARYLTLHYGQINLPLVWLDTLKIEQYREQLR
QVCRDWRLSSVRAAHGLPDYQAHNALNDAIATAELYLAQVHRLFDHQRAPLHVLARISS
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgtttaagagaaattcatggaaagcggaagggttaatcaatgagcgagtttgcgcacag
caccattaccttacaagggaacagtggccatcttcgttgagtgcgttgattgatatgcca
ctaccaagtgcatcttcagatcttaagtcacttgacacgctggtattggactttgagacc
agtggtcttgacccagagcaagataaggtcctgagtatgggctgggttgagatccgccag
agccaaatccgcttgagcagtgctcgccatatattggtgaatcagcctgttttgaacgga
tatgaatcggcaagaattcatcacctaaggccagaaacactacgtaattgtggagtgagt
gagcaccatgcgttttcgcaactgtttgatgtaatgaaagggaaagtcatagtggctcat
ggtagcgtaatagaaaagcgctttttagcgcgttatctcactctgcactatggacaaatc
aatttaccactggtttggctcgatacattaaaaatcgaacaatatcgtgagcagttaaga
caggtgtgccgcgattggcgtttgagctcggtaagagcggcacacggtttaccggactac
caggcacataatgcactcaatgacgcgattgccacagcagagttgtatttagcgcaagtt
caccgcttatttgatcatcaacgcgcaccgttgcatgttttggcccgtatttcgagttaa
DBGET
integrated database retrieval system
